| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00008912m |
| Family | GT8 |
| Protein Properties | Length: 696 Molecular Weight: 79797.9 Isoelectric Point: 8.7636 |
| Chromosome | Chromosome/Scaffold: 004783 Start: 7636 End: 10886 |
| Description | galacturonosyltransferase 3 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT8 | 343 | 667 | 0 |
| CLHMQLTTDYYFRDGVTKEHFHDAALKEEENKAKLEDRSLYHYAIFSDNVLAASVVVRSTVTNANEPEKHVFHIVTDRLNFAAMKMWFIAHPPQLATVHV ENIDNFKWLNSSYCSVLRQLESARLKEYYFKAHDPSSLSDGNENLKYRNPKYLSMLNHLRFYMPEIHPKLDKILFLDDDIVVQKDLTPLWDIDLKGMVNG AVETCKESFHRFDTYLNFSHPKISENFDPRACGWAFGMNMFDLKEWRKRNITGIYHYWQDLNEDRKLWKLGTLPPGLITFYNLTYPLNRTWHVLGLGYDP AVDIVEIDNAAVVHYNGNYKPWLDL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 696 Download |
| MASSSTAASS SAAAAAYPRT PFSLRRRPGL LAFLFVFLCF ISFQVVIHVP FARSAVSQWL 60 FSGHQGEHQR PKNCPGCANS QDVGSADKKI AYTDQYGRIK LFKVTAREFA SSSIWENPWL 120 PRDSQPIART QEAAEDLLLA NGSEATNLSS AETLATKSAD PIKLKRQVFR RRRKEQRVQE 180 LLQVDKKVEL EMRNAAINSS RNFDNKVRGS YNVWRQEFRF TNTDSTLRLM KDQIIMAKLY 240 ATIALSQKEP DMYALLMKCI KQSQTAIGDA LIDSELDSSA LERAKAMGHV LSSARDALYS 300 SSEVSRKLRA MLQSTELDID AVKKQNSFLV QHAAKTVPMP LHCLHMQLTT DYYFRDGVTK 360 EHFHDAALKE EENKAKLEDR SLYHYAIFSD NVLAASVVVR STVTNANEPE KHVFHIVTDR 420 LNFAAMKMWF IAHPPQLATV HVENIDNFKW LNSSYCSVLR QLESARLKEY YFKAHDPSSL 480 SDGNENLKYR NPKYLSMLNH LRFYMPEIHP KLDKILFLDD DIVVQKDLTP LWDIDLKGMV 540 NGAVETCKES FHRFDTYLNF SHPKISENFD PRACGWAFGM NMFDLKEWRK RNITGIYHYW 600 QDLNEDRKLW KLGTLPPGLI TFYNLTYPLN RTWHVLGLGY DPAVDIVEID NAAVVHYNGN 660 YKPWLDLAIS KYNLYWSKYV DLDSSHVQHC YASKQ* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PLN02718 | PLN02718 | 2.0e-152 | 185 | 690 | 515 | + Probable galacturonosyltransferase | ||
| PLN02523 | PLN02523 | 4.0e-166 | 275 | 690 | 422 | + galacturonosyltransferase | ||
| PLN02742 | PLN02742 | 6.0e-178 | 222 | 690 | 471 | + Probable galacturonosyltransferase | ||
| PLN02910 | PLN02910 | 0 | 76 | 694 | 634 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
| PLN02829 | PLN02829 | 0 | 224 | 690 | 467 | + Probable galacturonosyltransferase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0016757 | transferase activity, transferring glycosyl groups |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB47337.1 | 0 | 8 | 695 | 2 | 686 | Glycosyltransferase QUASIMODO1, putative, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | EAY78177.1 | 0 | 8 | 695 | 2 | 677 | hypothetical protein OsI_33224 [Oryza sativa Indica Group] |
| GenBank | EAZ15816.1 | 0 | 81 | 695 | 77 | 690 | hypothetical protein OsJ_31235 [Oryza sativa Japonica Group] |
| RefSeq | NP_001058636.1 | 0 | 54 | 695 | 93 | 697 | Os06g0727300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002439065.1 | 0 | 18 | 695 | 20 | 697 | hypothetical protein SORBIDRAFT_10g030870 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1ga8_A | 0.000008 | 491 | 664 | 75 | 252 | B Chain B, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate |
| PDB | 1g9r_A | 0.000008 | 491 | 664 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
| PDB | 1ss9_A | 0.000009 | 491 | 664 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
