| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00009193m |
| Family | AA1 |
| Protein Properties | Length: 561 Molecular Weight: 61144.4 Isoelectric Point: 7.0092 |
| Chromosome | Chromosome/Scaffold: 005396 Start: 12968 End: 14727 |
| Description | Cupredoxin superfamily protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| AA1 | 77 | 349 | 0 |
| NTGIHWHGIRQRGSPWADGTVGVTQCPILPGETFTYRFVVDRPGTYLYHAHYGMQRVAGLDGMLVVSVPDGVIEPFAYDEEHTVLLMDWWHKSVYEQAVG LASDPLEFVGEPQSLLINGRGMFINSSIPPADCALPPALFTAVPGRTYRLRVGSLTSLSSLNFEIEGHSMTVVEADGHYVRPVVVRSLFIYSGETYSVLV TADQDPSRNYWAASHVVGRKRETPSAMAVLSYAGNDPRAPPPTPRPAGPAWDDAAPRVEQSRSVAAAHPDHAL | |||
| Full Sequence |
|---|
| Protein Sequence Length: 561 Download |
| MRQPTMLAAV LWSLAAALLA EAKVHHHTWD IAYHRKSLDC FEKLAVTVNG EAPGPTIRAT 60 QGDTVVVTVR NKLETENTGI HWHGIRQRGS PWADGTVGVT QCPILPGETF TYRFVVDRPG 120 TYLYHAHYGM QRVAGLDGML VVSVPDGVIE PFAYDEEHTV LLMDWWHKSV YEQAVGLASD 180 PLEFVGEPQS LLINGRGMFI NSSIPPADCA LPPALFTAVP GRTYRLRVGS LTSLSSLNFE 240 IEGHSMTVVE ADGHYVRPVV VRSLFIYSGE TYSVLVTADQ DPSRNYWAAS HVVGRKRETP 300 SAMAVLSYAG NDPRAPPPTP RPAGPAWDDA APRVEQSRSV AAAHPDHALP VPPRPDRTLL 360 LLNANTRIDG HVRWAINGVS LRFPATPYLV SMNRGLRAAY DQRPPADAYD HRSYDVGSAA 420 AAAAAGGTVA SAAYRLALGS VVDVVLQNAV ALNNRSETHP WHLHGHDFWV LGYGEGRFEP 480 GRDEAGFNLR DPVMKNTVAL HPMGWTAVRF VADNPGVWLF HCHIEAHVYM GMGVVFEEGV 540 HKVGRLPGSI MGCGRSRGLN * |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| TIGR03390 | ascorbOXfungal | 3.0e-80 | 40 | 539 | 541 | + L-ascorbate oxidase, fungal type. This model describes a family of fungal ascorbate oxidases, within a larger family of multicopper oxidases that also includes plant ascorbate oxidases (TIGR03388), plant laccases and laccase-like proteins (TIGR03389), and related proteins. The member from Acremonium sp. HI-25 is characterized. | ||
| TIGR03389 | laccase | 8.0e-98 | 23 | 547 | 553 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. | ||
| TIGR03388 | ascorbase | 0 | 24 | 556 | 546 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
| PLN02604 | PLN02604 | 0 | 23 | 558 | 549 | + oxidoreductase | ||
| PLN02191 | PLN02191 | 0 | 24 | 557 | 551 | + L-ascorbate oxidase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005507 | copper ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAY47050.1 | 0 | 15 | 557 | 26 | 573 | ascorbate oxidase [Solanum lycopersicum] |
| GenBank | ACN27982.1 | 0 | 26 | 558 | 28 | 567 | unknown [Zea mays] |
| RefSeq | NP_001063614.1 | 0 | 23 | 558 | 24 | 571 | Os09g0507300 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002454922.1 | 0 | 21 | 559 | 31 | 586 | hypothetical protein SORBIDRAFT_03g001450 [Sorghum bicolor] |
| RefSeq | XP_002462285.1 | 0 | 26 | 558 | 27 | 569 | hypothetical protein SORBIDRAFT_02g023150 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1asq_B | 0 | 22 | 554 | 1 | 539 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 1asq_A | 0 | 22 | 554 | 1 | 539 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 1asp_B | 0 | 22 | 554 | 1 | 539 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 1asp_A | 0 | 22 | 554 | 1 | 539 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
| PDB | 1aso_B | 0 | 22 | 554 | 1 | 539 | A Chain A, Structure Of Ugt78g1 Complexed With Myricetin And Udp |
