| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00009281m |
| Family | GH37 |
| Protein Properties | Length: 239 Molecular Weight: 26210.2 Isoelectric Point: 5.3378 |
| Chromosome | Chromosome/Scaffold: 005021 Start: 14576 End: 16454 |
| Description | trehalase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
| Family | Start | End | Evalue |
| GH37 | 1 | 213 | 0 |
| MEQDIAAFAKIIGEKATSEKFLEASKARHIAIDSILWNSEMEQWLDYWLPTDGDSQQGVYQWKSDSQNRKIFASNFFPLWLNAYHSGSAKFADTAKSERV MASLQKSGLLCTAGIATSLTNTSQQWDFPNGWAPVQHLIAEGLLHSGSEEAVKLAEDIATRWVRTNYAAYKATGAMHEKYDVEACGKSGGGGEYKPQTGF GWSNGVVLSFLEE | |||
| Full Sequence |
|---|
| Protein Sequence Length: 239 Download |
| MEQDIAAFAK IIGEKATSEK FLEASKARHI AIDSILWNSE MEQWLDYWLP TDGDSQQGVY 60 QWKSDSQNRK IFASNFFPLW LNAYHSGSAK FADTAKSERV MASLQKSGLL CTAGIATSLT 120 NTSQQWDFPN GWAPVQHLIA EGLLHSGSEE AVKLAEDIAT RWVRTNYAAY KATGAMHEKY 180 DVEACGKSGG GGEYKPQTGF GWSNGVVLSF LEEFGWPKHK EIGCSRQGEV GLAGAQSD* 240 |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PRK13270 | treF | 2.0e-31 | 1 | 217 | 221 | + trehalase; Provisional | ||
| PRK13271 | treA | 6.0e-33 | 1 | 212 | 214 | + trehalase; Provisional | ||
| COG1626 | TreA | 4.0e-40 | 1 | 215 | 217 | + Neutral trehalase [Carbohydrate transport and metabolism] | ||
| pfam01204 | Trehalase | 2.0e-83 | 1 | 215 | 217 | + Trehalase. Trehalase (EC:3.2.1.28) is known to recycle trehalose to glucose. Trehalose is a physiological hallmark of heat-shock response in yeast and protects of proteins and membranes against a variety of stresses. This family is found in conjunction with pfam07492 in fungi. | ||
| PLN02567 | PLN02567 | 3.0e-136 | 1 | 224 | 224 | + alpha,alpha-trehalase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004555 | alpha,alpha-trehalase activity |
| GO:0005991 | trehalose metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ABB47896.1 | 0 | 1 | 198 | 341 | 537 | Trehalase family protein, expressed [Oryza sativa (japonica cultivar-group)] |
| GenBank | ABG25862.1 | 0 | 1 | 218 | 57 | 272 | trehalase [Saccharum officinarum] |
| GenBank | EAZ16710.1 | 0 | 1 | 197 | 252 | 447 | hypothetical protein OsJ_32186 [Oryza sativa Japonica Group] |
| RefSeq | NP_001065087.1 | 0 | 1 | 224 | 341 | 563 | Os10g0521000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002465049.1 | 0 | 1 | 225 | 356 | 579 | hypothetical protein SORBIDRAFT_01g031280 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 2wyn_D | 2e-23 | 1 | 212 | 314 | 500 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 2wyn_C | 2e-23 | 1 | 212 | 314 | 500 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 2wyn_B | 2e-23 | 1 | 212 | 314 | 500 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 2wyn_A | 2e-23 | 1 | 212 | 314 | 500 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| PDB | 2jjb_D | 2e-23 | 1 | 212 | 314 | 500 | X Chain X, Crystal Structure Of The Full-Length Autotransporter Esta From Pseudomonas Aeruginosa |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| trehalose degradation II (trehalase) | TREHALA-RXN | EC-3.2.1.28 | α,α-trehalase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
|---|---|---|---|---|
| Hit | Length | Start | End | EValue |
| JG944203 | 239 | 1 | 239 | 0 |
| GR879062 | 235 | 3 | 237 | 0 |
| JG877869 | 234 | 4 | 237 | 0 |
| JG920863 | 233 | 5 | 237 | 0 |
| JG827793 | 221 | 7 | 227 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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| Phylogeny |
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