Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00009495m |
Family | GT48 |
Protein Properties | Length: 1412 Molecular Weight: 163274 Isoelectric Point: 9.1403 |
Chromosome | Chromosome/Scaffold: 004578 Start: 598 End: 9587 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 516 | 1267 | 0 |
VPTNLDARRRISFFANSLFMEMPNAPKVRNMLPFSVLTPYYKEDVLFSSQNLEEPNEDGVSILFYLQKIYPDEWKNFLERVDRKSEEELREDEGLEEELR LWASYRGQTLTRTVRGMMYYRKALELQAFLDMAQDDDLMEGYRATELMSEDSQLMTQCKAIADMKFTYVVSCQQYGIQKRSGEPCAHDILRLMTTYPSLR VAYIDEVEARSQDRNKKVEKVYYSALVKASVTKPNEPGQSLDQVIYKIKLPGNAILGEGKPENQNHAIIFTRGECLQTIDMNQEHYMEEALKMRNLLQEF EEKHDGVRYPSILGVREHIFTGSVSSLAWFMSNQETSFVTIGQRVLANPLRVRFHYGHPDIFDRLFHLTRGGVSKASKIINLSEDIFAGFNSTLREGNVT HHEYMQVGKGRDVGLNQISLFEAKIANGNGEQTMSRDIYRLGHRFDFFRMLSCYYTTIGFYFSTMITVWTVYVFLYGRLYLVLSGLDEALATGRRFLHNA PLQVALASESFVQLGFLMALPMMMEIGLERGFRTALSDFVLMQLQLASVFFTFSLGTKTHYYGRTLLHGGAEYRATGRGFVVFHAKFADNYRLYSRSHFV KGIELMILLVVYEIFGQSYRGAITYIFITISMWFMVGTWLFAPFLFNPSGFEWQKIVDDWTDWHKWISNRGGIGVAPEKSWESWWDKEQEPLRHSGKRGT IVEILLALRFFIYQYGLVYHLNITKKITKDTHSVLVYCFSWVVIFVILLVMK |
Full Sequence |
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Protein Sequence Length: 1412 Download |
ILDIVFSWKA RRSMSFAVKL RYVLKLISAA AWVVILPVTY AYTWENPTGL ARTIKRWLGD 60 GQNQPSLYIL AVVIYLAPNM LASMLFLFPF LRRFLESSNV KVIMFMMWWS QPRLFVGRGM 120 HEGAFSLFKY TMFWVLLLAM KLTVSFYIEI KPLVQPTKDI MREPIRTFQW HEFFPHGNNN 180 IGVVIALWAP IILVYFMDTQ IWYALFSTLI GGIYGAYRRL GEIRTLGMLR SRFESLPVAF 240 NERLIPSDTN KSKGFRAAFS RKPKASGDEK EEEKRAARFA QMWNLIITSF REEDLIDNRE 300 MDLLLVPYCK DRELNIFQWP PFLLASKIPI ALDMAADSGG KDRDLTKRMG SDPYFSYAIR 360 ECYASFKNII NTLVLGQREK IVIKEIFDVV DKHIAEETLI KDLNMRSLPA LSKKFIDLLE 420 LLQKNKEEDL GQVVILFQDM LEVVTRDIME EEQLGGMLES IHGGNNRKHV GMTTLDQQDQ 480 LFAKAIRFPM EESDAWTEKI KRLHLLLTVK ESAMDVPTNL DARRRISFFA NSLFMEMPNA 540 PKVRNMLPFS VLTPYYKEDV LFSSQNLEEP NEDGVSILFY LQKIYPDEWK NFLERVDRKS 600 EEELREDEGL EEELRLWASY RGQTLTRTVR GMMYYRKALE LQAFLDMAQD DDLMEGYRAT 660 ELMSEDSQLM TQCKAIADMK FTYVVSCQQY GIQKRSGEPC AHDILRLMTT YPSLRVAYID 720 EVEARSQDRN KKVEKVYYSA LVKASVTKPN EPGQSLDQVI YKIKLPGNAI LGEGKPENQN 780 HAIIFTRGEC LQTIDMNQEH YMEEALKMRN LLQEFEEKHD GVRYPSILGV REHIFTGSVS 840 SLAWFMSNQE TSFVTIGQRV LANPLRVRFH YGHPDIFDRL FHLTRGGVSK ASKIINLSED 900 IFAGFNSTLR EGNVTHHEYM QVGKGRDVGL NQISLFEAKI ANGNGEQTMS RDIYRLGHRF 960 DFFRMLSCYY TTIGFYFSTM ITVWTVYVFL YGRLYLVLSG LDEALATGRR FLHNAPLQVA 1020 LASESFVQLG FLMALPMMME IGLERGFRTA LSDFVLMQLQ LASVFFTFSL GTKTHYYGRT 1080 LLHGGAEYRA TGRGFVVFHA KFADNYRLYS RSHFVKGIEL MILLVVYEIF GQSYRGAITY 1140 IFITISMWFM VGTWLFAPFL FNPSGFEWQK IVDDWTDWHK WISNRGGIGV APEKSWESWW 1200 DKEQEPLRHS GKRGTIVEIL LALRFFIYQY GLVYHLNITK KITKDTHSVL VYCFSWVVIF 1260 VILLVMKTVS VGRRRFSAEF QLVFRLIKGL IFITFTSIVI ILIAIPGMTV LDIFVCILAF 1320 MPTGWGLLLI AQAIRPVIQK IGLWGSIKAL ARGYEILMGL LLFTPIAFLA WFPFVSEFQT 1380 RMLFNQAFSR GLQISRILGG HKKDRATRNK E* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02364 | Glucan_synthase | 0 | 516 | 1263 | 819 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD23015.1 | 0 | 1 | 1411 | 563 | 1969 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
DDBJ | BAD62105.1 | 0 | 1 | 1411 | 552 | 1959 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
GenBank | EEE66395.1 | 0 | 1 | 1411 | 511 | 1982 | hypothetical protein OsJ_22734 [Oryza sativa Japonica Group] |
RefSeq | NP_001058646.1 | 0 | 92 | 1411 | 556 | 1872 | Os06g0728800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002439067.1 | 0 | 1 | 1411 | 554 | 1965 | hypothetical protein SORBIDRAFT_10g030970 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |