| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00009580m |
| Family | GT31 |
| Protein Properties | Length: 268 Molecular Weight: 30073.6 Isoelectric Point: 6.6815 |
| Chromosome | Chromosome/Scaffold: 004535 Start: 3940 End: 4822 |
| Description | Galactosyltransferase family protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GT31 | 40 | 205 | 6.7e-32 |
| ERRDIVRMAYALQPPAARARVDVRFVFCSVTDPVDAALVAVEARRHGDVVVLDCAENMNDGKTYAYLSSAPRLFAAAPYDYVMKTDDDTYLRVAALADEL RGKPREDVYLGYGYAMGGQPMPFMHGMGYVVSWDVASWVAGADEILARNDTLGPEDLMVGKWLNLA | |||
| Full Sequence |
|---|
| Protein Sequence Length: 268 Download |
| MKPPTPTSYL LLAPLAIILL VFVPDFSLLI SVLTMPNRRE RRDIVRMAYA LQPPAARARV 60 DVRFVFCSVT DPVDAALVAV EARRHGDVVV LDCAENMNDG KTYAYLSSAP RLFAAAPYDY 120 VMKTDDDTYL RVAALADELR GKPREDVYLG YGYAMGGQPM PFMHGMGYVV SWDVASWVAG 180 ADEILARNDT LGPEDLMVGK WLNLAGRGRN RYDLKPRMYD LNWDMDNFRP DTVAVHMLKD 240 NRRWAAASRY FNVTAGIERP SDLHHLP* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| PTZ00210 | PTZ00210 | 0.0007 | 101 | 179 | 84 | + UDP-GlcNAc-dependent glycosyltransferase; Provisional | ||
| PLN03133 | PLN03133 | 4.0e-7 | 28 | 178 | 178 | + beta-1,3-galactosyltransferase; Provisional | ||
| PLN03193 | PLN03193 | 9.0e-10 | 26 | 202 | 213 | + beta-1,3-galactosyltransferase; Provisional | ||
| pfam01762 | Galactosyl_T | 8.0e-10 | 40 | 206 | 197 | + Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0006486 | protein glycosylation |
| GO:0008378 | galactosyltransferase activity |
| GO:0016020 | membrane |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| RefSeq | NP_001063243.1 | 0 | 24 | 266 | 72 | 311 | Os09g0433000 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001132756.1 | 0 | 25 | 267 | 74 | 318 | hypothetical protein LOC100194243 [Zea mays] |
| RefSeq | NP_001136904.1 | 0 | 24 | 261 | 89 | 326 | hypothetical protein LOC100217061 [Zea mays] |
| RefSeq | XP_002462426.1 | 0 | 23 | 267 | 94 | 335 | hypothetical protein SORBIDRAFT_02g025420 [Sorghum bicolor] |
| RefSeq | XP_002462427.1 | 0 | 26 | 267 | 74 | 325 | hypothetical protein SORBIDRAFT_02g025430 [Sorghum bicolor] |
