Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00009928m |
Family | GT48 |
Protein Properties | Length: 1787 Molecular Weight: 207005 Isoelectric Point: 9.511 |
Chromosome | Chromosome/Scaffold: 005268 Start: 10335 End: 15695 |
Description | glucan synthase-like 1 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT48 | 884 | 1643 | 0 |
VPKNPEARRRITFFSNSLFMNMPRAPTVEKMMAFSVLTPYYNEDVMYNRDQLRRENEDGVSILFYLQKIYEDDWRNFLERMRREGMTDDDEIWTVKYPEL RLWASYRGQTLARTVRGMMYYHRALKMLAFLDTASEVDITEGTKHLASFGSIRHENDVYPMNDGLLQRRQRRLDRGTSTVSQLFKGQEDGAALMKYTYVV ACQIYGNQKIARDQRAEDILTLMKKNEALRVAYVDEVHHQGYTQYYSVLVKFDQSLQREVEIYRIRLPGPLKLGEGKPENQNHAIIFTRGDAVQTIDMNQ DNYFEEALKMRNLLEQYNYYHGSRKPTLLGVREHVFTGSVSSLAWFMSAQETSFVTLGQRVLANPLKVRMHYGHPDVFDRLWFLTRGGISKASRVINISE DIFAGFNCTLRGGNVSHHEYIQVGKGRDVGLNQISMFEAKVSSGNGEQTLSRDIYRLGHRLDFFRMLSVFYTTVGFYFNTMLVVLTVYTFVWGRLYLALS GLEAGIQGSANSTNNKALGTVLNQQFIIQIGLFTALPMIIENSLEQGFLPAIWDFFTMQMNFSSVFYTFSMGTKSHYYGRTILHGGAKYRATGRGFVVQH KSFAENYRLYARSHFIKAIELGIILTVYAAHSVIARNTLVYIIMNISSWFLVVSWIMAPFAFNPSGFDWLKTVYDFDDFMNWIWYPGGLFSKPEQSWEVW WFEEQDHLRTTGLWGKILEILLDLRYFFFQYGVVYQLKIANNSKSIAVYLLSWICVAVIF |
Full Sequence |
---|
Protein Sequence Length: 1787 Download |
MSLRRNRRAA AAAAAGGGGY PEPAAYNIIP IHDVVMHGEH PSLRFPEVRA AVEALAHAAD 60 LPAPPLARAW DALRADLFDW LGATFGFQLH NVRNQREHLV LLLANAQLRA GGTLPPDHPA 120 DVLHHSIARG IRKKLLKNYT SWCSYLGKRP HVYVPSAGRR VQGAGPDTRR DLLYTALYLL 180 IWGEAANLRF MPECLCYIFH YMALDLNHVI DQSVDIETGR PSIPAVHGED AFLEKVVTPI 240 YNVLKAEVEF SRNGTKPHSA WRNYDDVNEY FWSRRVFKRL QWPLSPVRSF FIQPGNPGRI 300 GKTGFVEQRS FWNVYRSFDR VWVMLILFFQ AAMIVAWDGR TPWDSLRFRD IQVRVLSVFI 360 TWAALRIAQA VLDAGTQYSL VRRDTTLLAV RMVLKVLVAV GWTITFIVLY VRMWDQRWRD 420 RRWSFAANSR VLNYLEAAAV FVIPQVLAVV LFIVPWIRNF LEKTNWRILY VLTWWFQTRT 480 FVGRGVREGL IDNIKYTTFW VCLLTAKFGF SYFLQIKPMV GPTKTILSLH DIRRNWFEFM 540 PHTERIAVIL LWIPVVLIYL MDIQIWYAVF SSLTGALIGL FSHLGEIRSV EQLRLRFQFF 600 ASAMQFNLMP EEHLDAVRGG LRSKLYDAIN RLKLRYGFGR PYRKIEANEV EAKRFALIWN 660 EIIQTFREED IISDNEVELL ELPPVVWKIR VVRWPCFLLN NELLLALSQA KELVADDRTH 720 WTRICNNEYR RCAVIEAYDS IRHLLLEIIE ERTVEHIIVS QLFLAFDAEM DNGKFSEEHK 780 LELLPEIHSS VITLVELLLK EKKDQTKIVN TLQTLYVFAI HDFPKKKMDM EQLRQAKLAP 840 SKAEESSLLF EDVLKCPSND DVSFYKQVRR LHTILTSRDS MSNVPKNPEA RRRITFFSNS 900 LFMNMPRAPT VEKMMAFSVL TPYYNEDVMY NRDQLRRENE DGVSILFYLQ KIYEDDWRNF 960 LERMRREGMT DDDEIWTVKY PELRLWASYR GQTLARTVRG MMYYHRALKM LAFLDTASEV 1020 DITEGTKHLA SFGSIRHEND VYPMNDGLLQ RRQRRLDRGT STVSQLFKGQ EDGAALMKYT 1080 YVVACQIYGN QKIARDQRAE DILTLMKKNE ALRVAYVDEV HHQGYTQYYS VLVKFDQSLQ 1140 REVEIYRIRL PGPLKLGEGK PENQNHAIIF TRGDAVQTID MNQDNYFEEA LKMRNLLEQY 1200 NYYHGSRKPT LLGVREHVFT GSVSSLAWFM SAQETSFVTL GQRVLANPLK VRMHYGHPDV 1260 FDRLWFLTRG GISKASRVIN ISEDIFAGFN CTLRGGNVSH HEYIQVGKGR DVGLNQISMF 1320 EAKVSSGNGE QTLSRDIYRL GHRLDFFRML SVFYTTVGFY FNTMLVVLTV YTFVWGRLYL 1380 ALSGLEAGIQ GSANSTNNKA LGTVLNQQFI IQIGLFTALP MIIENSLEQG FLPAIWDFFT 1440 MQMNFSSVFY TFSMGTKSHY YGRTILHGGA KYRATGRGFV VQHKSFAENY RLYARSHFIK 1500 AIELGIILTV YAAHSVIARN TLVYIIMNIS SWFLVVSWIM APFAFNPSGF DWLKTVYDFD 1560 DFMNWIWYPG GLFSKPEQSW EVWWFEEQDH LRTTGLWGKI LEILLDLRYF FFQYGVVYQL 1620 KIANNSKSIA VYLLSWICVA VIFGMFVLMS YARDKYAAKQ HLYYRLVQTA VIILVVLVLI 1680 IFLKFTKFEI VDIFTSLLAF IPTGWGLISI AQVIRPFIES TVVWNSVISV ARLYEILLGV 1740 FVMAPVAFLS WLPGFQEMQT RVLFNEGFSR GLQISRILTG KKANTA* |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam14288 | FKS1_dom1 | 8.0e-56 | 169 | 283 | 115 | + 1,3-beta-glucan synthase subunit FKS1, domain-1. The FKS1_dom1 domain is likely to be the 'Class I' region just N-terminal to the first set of transmembrane helices that is involved in 1,3-beta-glucan synthesis itself. This family is found on proteins with family Glucan_synthase, pfam02364. | ||
pfam02364 | Glucan_synthase | 0 | 884 | 1662 | 846 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACS36253.1 | 0 | 168 | 1785 | 6 | 1625 | glucan synthase-like 7 [Hordeum vulgare] |
DDBJ | BAD87286.1 | 0 | 171 | 1783 | 2 | 1615 | putative callose synthase 1 catalytic subunit [Oryza sativa Japonica Group] |
GenBank | EAZ13575.1 | 0 | 1 | 1362 | 1 | 1366 | hypothetical protein OsJ_03491 [Oryza sativa Japonica Group] |
GenBank | EAZ13575.1 | 2e-33 | 1587 | 1783 | 1334 | 1530 | hypothetical protein OsJ_03491 [Oryza sativa Japonica Group] |
RefSeq | NP_001044278.1 | 0 | 1 | 1783 | 1 | 1787 | Os01g0754200 [Oryza sativa (japonica cultivar-group)] |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |