CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00009935m
FamilyAA2
Protein PropertiesLength: 354 Molecular Weight: 37678.6 Isoelectric Point: 5.3704
ChromosomeChromosome/Scaffold: 003963 Start: 16777 End: 18346
DescriptionPeroxidase superfamily protein
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
AA2643100
  DMGIAAGLIRIFFHDCFPQGCDASVLLSGSKSEQLEIPNQTLRPEALKLIDDIRAALHRACGPKVSCSDITTLATRDAVVATGGPYFDVPLGRRDGFSPA
  SSDLVGTLPAPFFDVPTLMEAFKNRSLDTADLVALSGAHTVGRGHCASFSDRLPPNVDDTIDPAFREKLTAKCANDPNATQVLDVRTPNAFDNKYYFDLI
  AKQGLFKSDQGLMDHPATKRMATRFSLNQGAFFDQFARSMVKMSQMD
Full Sequence
Protein Sequence     Length: 354     Download
MSSFSSSSSS TAAAAVLLLA VSLAAAVTVN EPIADGLSWS FYDSSCPSVE GTVRWHVAEA    60
LRRDMGIAAG LIRIFFHDCF PQGCDASVLL SGSKSEQLEI PNQTLRPEAL KLIDDIRAAL    120
HRACGPKVSC SDITTLATRD AVVATGGPYF DVPLGRRDGF SPASSDLVGT LPAPFFDVPT    180
LMEAFKNRSL DTADLVALSG AHTVGRGHCA SFSDRLPPNV DDTIDPAFRE KLTAKCANDP    240
NATQVLDVRT PNAFDNKYYF DLIAKQGLFK SDQGLMDHPA TKRMATRFSL NQGAFFDQFA    300
RSMVKMSQMD VLTGNKGEIR HLNCAVPNAA AASSPGVLVL RTDQQDDGLA ADA*          360
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00314plant_peroxidase_like7.0e-2267308261+
pfam00141peroxidase1.0e-5653204152+
PLN03030PLN030301.0e-6341326298+
cd00693secretory_peroxidase9.0e-14636326301+
Gene Ontology
GO TermDescription
GO:0004601peroxidase activity
GO:0006979response to oxidative stress
GO:0020037heme binding
GO:0055114oxidation-reduction process
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACA05820.102735327357anionic peroxidase [Zea mays]
GenBankACF81556.102735334364unknown [Zea mays]
RefSeqNP_001105489.102735327356anionic peroxidase [Zea mays]
RefSeqNP_001132567.102435328355hypothetical protein LOC100194034 [Zea mays]
RefSeqXP_002448820.101333414346hypothetical protein SORBIDRAFT_06g033840 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1bgp_A0323284305A Chain A, Crystal Structure Of Barley Grain Peroxidase 1
PDB1sch_B0373282294A Chain A, Peanut Peroxidase
PDB1sch_A0373282294A Chain A, Peanut Peroxidase
PDB1qgj_B0373282299A Chain A, Arabidopsis Thaliana Peroxidase N
PDB1qgj_A0373282299A Chain A, Arabidopsis Thaliana Peroxidase N
Metabolic Pathways
Pathway NameReactionECProtein Name
betanidin degradationRXN-8635EC-1.11.1.7peroxidase
Transmembrane Domains
StartEnd
729
Signal Peptide
Cleavage Site
26
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CT854010301313280
CB644368261302870
DT940416224302490
CB682628257302830
DR810844223302480
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_114_00002.1Aquca_023_00176.2Aquca_023_00176.1Aquca_023_00171.1Aquca_023_00181.1
Aquca_023_00178.1Aquca_023_00180.1Aquca_023_00179.1
Arabidopsis lyrata895007
Arabidopsis thalianaAT1G71695.1
Brachypodium distachyonBradi3g13590.1Bradi3g33940.1Bradi2g09600.1Bradi4g27680.1Bradi5g27130.1
Bradi5g27150.1Bradi2g17120.1Bradi5g27220.1Bradi5g27210.1Bradi5g27200.1
Bradi5g27170.1Bradi5g27160.1
Brassica rapaBra003918Bra016127
Carica papayaevm.model.supercontig_49.84
Capsella rubellaCarubv10020541m
Citrus clementinaCiclev10001726m
Citrus sinensisorange1.1g019278m
Eucalyptus grandisEucgr.I00020.1Eucgr.F04198.1Eucgr.F04195.1Eucgr.L02740.1Eucgr.J02563.1
Fragaria vescamrna27591.1-v1.0-hybrid
Glycine maxGlyma16g27890.1Glyma10g36680.1Glyma20g30910.1Glyma16g27880.1Glyma16g27900.1
Glyma10g36690.1Glyma16g27900.3
Gossypium raimondiiGorai.010G131800.1Gorai.005G077600.1
Linum usitatissimumLus10028735Lus10028689
Malus domesticaMDP0000176436.181.349MDP0000176436.181.349MDP0000642832
Manihot esculentacassava4.1_025536mcassava4.1_010796mcassava4.1_025889mcassava4.1_032882mcassava4.1_031254m
cassava4.1_010776mcassava4.1_027775mcassava4.1_013268mcassava4.1_021820m
Medicago truncatulaMedtr1g106870.1
Mimulus guttatusmgv1a009174m
Oryza sativaLOC_Os08g02110.1LOC_Os01g73220.1LOC_Os01g73170.1LOC_Os01g73200.1LOC_Os04g59150.1
LOC_Os01g73190.1LOC_Os04g59160.1LOC_Os04g59200.1LOC_Os04g59210.1LOC_Os04g59260.1
LOC_Os04g59190.1LOC_Os04g59150.2
Panicum virgatumPavirv00006034mPavirv00047812mPavirv00054325mPavirv00068704mPavirv00024512m
Pavirv00006543mPavirv00052301mPavirv00016398mPavirv00020256mPavirv00002644m
Phaseolus vulgarisPhvul.007G082600.1Phvul.007G082700.1Phvul.004G090800.1
Picea abiesMA_62726g0010MA_10427332g0010MA_10432033g0020MA_10275776g0010MA_66200g0010
MA_497337g0010MA_57932g0010MA_13490g0020MA_8813326g0010MA_10430613g0010.304.542
MA_10430613g0010.304.542MA_10432865g0020MA_10115394g0010MA_73034g0010MA_1125g0010.202.340
MA_1125g0010.202.340MA_170633g0010MA_466251g0010
Populus trichocarpaPotri.005G195600.1Potri.002G065300.1Potri.005G195700.1
Prunus persicappa007748m
Ricinus communis28644.m00090129863.m00107629863.m001072
Setaria italicaSi001960mSi002014mSi022514mSi002007mSi022669m
Si022524mSi022622m
Selaginella moellendorffii177321230656
Sorghum bicolorSb06g033840.1Sb03g046810.1Sb03g046760.1Sb06g033870.1Sb06g033850.1
Sb06g033860.1
Thellungiella halophilaThhalv10018753mThhalv10018936m
Vitis viniferaGSVIVT01034574001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny  (This image is cropped. Click for full image.)