Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00010181m |
Family | GT37 |
Protein Properties | Length: 839 Molecular Weight: 92052.4 Isoelectric Point: 8.5934 |
Chromosome | Chromosome/Scaffold: 004127 Start: 6703 End: 13344 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT37 | 356 | 812 | 0 |
SSRRAERGAHDRLLSGLLSPDFDGATCLSRYEASKRWKPSPFPVSPYLIQKLRRYEANHRRCGPGTANYRAAMAQLMSGRNADGAECKYVVWLPLQGLGN RMLSVVSTFLYALLAGRVLLVHEPPEMEGLFCEPFPGTSWVLPPGFPYTDGFSASTKESYANMLENNIVRSDGGGDASALPAYVYFHLEQIGLRLQNHTF CEEDHRVLSRFNWMVLRSDSYFAVALFLMPVYRGELDRMFPAKASVFHHLGRYLLHPGNRAWGIVERFYDGYLAGADERLGIQVRPAPFLPITSEDMYEQ IARCAREHDLLPRVTGTSGDNPGARLPASGVAKVKAVLVVSLKPEYYDKLHSVYYTNATATGEVVTVFQPSHDQDQHTEALAHNERALAEIFLLSYSDRL VTTGFSTFGYTAHSLAGLRPWLLLLPDRNTMTAEVACVRSASVEPCLHSPPSLVCRA |
Full Sequence |
---|
Protein Sequence Length: 839 Download |
MTGPTPSPTS AAPPPNPLAA ASSFLHHHLS RLASHLTAPR PALAAAATRA PGPQGASLSL 60 ALAPDEVARA LTGTPVFTVC NSNNEFVLVS DPGTGLRSLG LLCFRSEDAD ALLTHVRTRQ 120 PVLGRGAKVV PITLDQVYML KAEGIAFRFL PDPLQIKNAL ELKSGLTGFD GVPVFQSDLL 180 VVKKQKKRYC PIYFQKEDIE RELTKASKSS RGSALSKKIM VGSLEDVLKK MEISERNSGW 240 DDLIFIPPGK SLNQHINEIS TNAWRRRAMG SVGAIQGERH LPPVAEKRRP SGLGAVTAVL 300 FLASPLLLLF FLFGDRAAAS IAADYPAWQR FKVQSTCSAP SSFAQHRFHG SGNAPSSRRA 360 ERGAHDRLLS GLLSPDFDGA TCLSRYEASK RWKPSPFPVS PYLIQKLRRY EANHRRCGPG 420 TANYRAAMAQ LMSGRNADGA ECKYVVWLPL QGLGNRMLSV VSTFLYALLA GRVLLVHEPP 480 EMEGLFCEPF PGTSWVLPPG FPYTDGFSAS TKESYANMLE NNIVRSDGGG DASALPAYVY 540 FHLEQIGLRL QNHTFCEEDH RVLSRFNWMV LRSDSYFAVA LFLMPVYRGE LDRMFPAKAS 600 VFHHLGRYLL HPGNRAWGIV ERFYDGYLAG ADERLGIQVR PAPFLPITSE DMYEQIARCA 660 REHDLLPRVT GTSGDNPGAR LPASGVAKVK AVLVVSLKPE YYDKLHSVYY TNATATGEVV 720 TVFQPSHDQD QHTEALAHNE RALAEIFLLS YSDRLVTTGF STFGYTAHSL AGLRPWLLLL 780 PDRNTMTAEV ACVRSASVEP CLHSPPSLVC RAEQDLDPVA HVPFLRHCED VDFGLKLI* 840 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd11548 | NodZ_like | 1.0e-5 | 449 | 767 | 332 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. | ||
pfam04278 | Tic22 | 5.0e-87 | 57 | 255 | 213 | + Tic22-like family. The preprotein translocation at the inner envelope membrane of chloroplasts so far involves five proteins: Tic110, Tic55, Tic40, Tic22 (this family) and Tic20. The molecular function of these proteins has not yet been established. | ||
TIGR00995 | 3a0901s06TIC22 | 2.0e-89 | 59 | 260 | 203 | + chloroplast protein import component, Tic22 family. Two families of proteins are involved in the chloroplast envelope import appartus.They are the three proteins of the outer membrane (TOC) and four proteins in the inner membrane (TIC). This family is specific for the Tic22 protein [Transport and binding proteins, Amino acids, peptides and amines]. | ||
pfam03254 | XG_FTase | 0 | 349 | 812 | 467 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ00131.1 | 0 | 366 | 838 | 75 | 547 | hypothetical protein OsI_22135 [Oryza sativa Indica Group] |
GenBank | EAZ36251.1 | 0 | 366 | 838 | 75 | 532 | hypothetical protein OsJ_20573 [Oryza sativa Japonica Group] |
RefSeq | NP_001048209.1 | 0 | 286 | 838 | 20 | 573 | Os02g0763200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001057125.1 | 0 | 366 | 838 | 75 | 547 | Os06g0212600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002438040.1 | 0 | 269 | 838 | 1 | 559 | hypothetical protein SORBIDRAFT_10g007150 [Sorghum bicolor] |