Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00010319m |
Family | GH35 |
Protein Properties | Length: 762 Molecular Weight: 84220.4 Isoelectric Point: 5.6422 |
Chromosome | Chromosome/Scaffold: 004613 Start: 4528 End: 17002 |
Description | beta galactosidase 9 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 74 | 376 | 0 |
ILGGKRRMLVSAGLHYPRATPEMWPSLIAKCKEGGADVIETYIFWNGHEPAKGQYYFEGRFDIVKFAKLVAAEGLFLFLRIGPYACAEWNFGGFPVWLRD IPGIEFRTDNEPYKAEMQSFVTKIVNIMKEEKLYSWQGGPIILQQIENEYGNIQDRYGQAGKRYMLWAAQMALALDTGVPWVMCRQTDAPEQILDTCNAF YCDGFKPNSYNKPTIWTEDWDGWYADWGEPLPHRPAQDSAFAVARFYQRGGSLQNYYMYFGGTNFERTAGGPRQITSYDYDAPIDEYGILRQPKWGHLKD LHA |
Full Sequence |
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Protein Sequence Length: 762 Download |
MATASLSPPP RWPPPPLGLL PLLVLILACL AAQAPPRAAE AAGVLRQVVA GGGDGDGGTF 60 FEPFNVTYDH RAVILGGKRR MLVSAGLHYP RATPEMWPSL IAKCKEGGAD VIETYIFWNG 120 HEPAKGQYYF EGRFDIVKFA KLVAAEGLFL FLRIGPYACA EWNFGGFPVW LRDIPGIEFR 180 TDNEPYKAEM QSFVTKIVNI MKEEKLYSWQ GGPIILQQIE NEYGNIQDRY GQAGKRYMLW 240 AAQMALALDT GVPWVMCRQT DAPEQILDTC NAFYCDGFKP NSYNKPTIWT EDWDGWYADW 300 GEPLPHRPAQ DSAFAVARFY QRGGSLQNYY MYFGGTNFER TAGGPRQITS YDYDAPIDEY 360 GILRQPKWGH LKDLHAAIKL CEPALIAVDG SPQYVKLGPM QEAHVYSSGK IHTNGSISEN 420 GQICSAFLAN IDEHKYVSVW IFGKSYSLPP WSVSILPDCE NVAFNTARVG TQTSVFTVES 480 GSPSYSSRHK PGTLSLIGGP YLSSTWWTSK EPIGKWGEGS FVAQGILEHL NVTKDISDYL 540 SYTMSVNISD EDVAYWNSKG VLPSLTIDQI RDVARVFVNG KLAGSMVGHW VSLNQPVHLV 600 QGPNELMLLS EIVGLQNYGA FLEKDGAGFR GQVKLTGLSN GDIDLTNSLW TYQIGLKGEF 660 LRIYAPENQG YAKWSSMQND DTQTPFTWFK TMFDAPEGND PVAIGLGSMG KGQAWVNGHL 720 IGRYWSIVAP ESGCPSSCNY AGAYGDSKCR SNCGMATQSW Y* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG1874 | LacA | 8.0e-19 | 66 | 368 | 366 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 7.0e-145 | 74 | 378 | 320 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 65 | 761 | 703 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABA97655.2 | 0 | 41 | 699 | 38 | 705 | Beta-galactosidase precursor, putative, expressed [Oryza sativa (japonica cultivar-group)] |
GenBank | EAY82934.1 | 0 | 41 | 699 | 38 | 697 | hypothetical protein OsI_38151 [Oryza sativa Indica Group] |
GenBank | EEE53129.1 | 0 | 41 | 699 | 38 | 732 | hypothetical protein OsJ_35927 [Oryza sativa Japonica Group] |
RefSeq | NP_001066673.1 | 0 | 41 | 761 | 38 | 759 | Os12g0429200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002442888.1 | 0 | 44 | 761 | 48 | 763 | hypothetical protein SORBIDRAFT_08g004410 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 9e-39 | 74 | 374 | 16 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3d3a_A | 0.00001 | 564 | 727 | 399 | 548 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 2e-35 | 64 | 374 | 9 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 2e-35 | 64 | 374 | 9 | 330 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |