| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00010348m |
| Family | GT28 |
| Protein Properties | Length: 539 Molecular Weight: 57602.6 Isoelectric Point: 9.0843 |
| Chromosome | Chromosome/Scaffold: 003873 Start: 10382 End: 15288 |
| Description | monogalactosyl diacylglycerol synthase 1 |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GT28 | 350 | 508 | 2.5e-30 |
| VLLMGGGEGMGPIEATAKALGDTLYDEILGEPTGQILVICGRNKKLANRLQSINWKVPVQVKGFVTKMEECMGACDCIITKAGPGTIAEAMIRGLPIILN DYIAGQEAGNVPYVVENGCGKFSKSPKQIAKIVADWFGPKSDEFRVMSQNCLKLARPDA | |||
| Full Sequence |
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| Protein Sequence Length: 539 Download |
| MPAPPAEPAL PAAFLCVPSP LLSAPLPGAG AASASPAPSP HHASFLPRPR GGPRALSAAV 60 SAPGPASSAA SRFHRMWGEF ARFVRLHGNQ IAPLGFASLG LGFGGGDGGG GNAGGGGGGG 120 GGGDVDGVGE VEEAAARAEP PKKVLILMSD TGGGHRASAE AIKAAFIQEF GDDYQVFVTD 180 LWTDHTPWPF NQLPRSYSFL VKHGPLWKMT YYGTAPRVVH QPHFAATSTF IAREVAKGLM 240 KYQPDVIISV HPLMQHVPLR ILRSKGLLDK IPFTTVITDL STCHPTWFHK LVTRCYCPST 300 EVEKRALKAG LKPSQIKVYG LPVRPSFVKP VRPKDELRRE LGMDEDLSAV LLMGGGEGMG 360 PIEATAKALG DTLYDEILGE PTGQILVICG RNKKLANRLQ SINWKVPVQV KGFVTKMEEC 420 MGACDCIITK AGPGTIAEAM IRGLPIILND YIAGQEAGNV PYVVENGCGK FSKSPKQIAK 480 IVADWFGPKS DEFRVMSQNC LKLARPDAVF KIVHDLHELV RQKCFVPQYA LTHVQHRG* 540 |
| Functional Domains Download unfiltered results here | ||||||||
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG0707 | MurG | 2.0e-27 | 143 | 513 | 380 | + UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
| PRK13608 | PRK13608 | 9.0e-32 | 239 | 520 | 285 | + diacylglycerol glucosyltransferase; Provisional | ||
| PRK13609 | PRK13609 | 4.0e-41 | 142 | 519 | 390 | + diacylglycerol glucosyltransferase; Provisional | ||
| pfam06925 | MGDG_synth | 6.0e-73 | 155 | 323 | 169 | + Monogalactosyldiacylglycerol (MGDG) synthase. This family represents a conserved region of approximately 180 residues within plant and bacterial monogalactosyldiacylglycerol (MGDG) synthase (EC:2.4.1.46). In Arabidopsis, there are two types of MGDG synthase which differ in their N-terminal portion: type A and type B. | ||
| PLN02605 | PLN02605 | 0 | 144 | 523 | 382 | + monogalactosyldiacylglycerol synthase | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009058 | biosynthetic process |
| GO:0009247 | glycolipid biosynthetic process |
| GO:0016758 | transferase activity, transferring hexosyl groups |
| GO:0030246 | carbohydrate binding |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACF84568.1 | 0 | 1 | 530 | 1 | 526 | unknown [Zea mays] |
| RefSeq | NP_001142118.1 | 0 | 1 | 530 | 1 | 526 | hypothetical protein LOC100274282 [Zea mays] |
| Swiss-Prot | Q69QJ7 | 0 | 66 | 530 | 69 | 532 | MGDG1_ORYSJ RecName: Full=Probable monogalactosyldiacylglycerol synthase 1, chloroplastic; Short=OsMGD1; Flags: Precursor |
| RefSeq | XP_002309689.1 | 0 | 45 | 530 | 49 | 534 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002462401.1 | 0 | 1 | 530 | 1 | 531 | hypothetical protein SORBIDRAFT_02g025070 [Sorghum bicolor] |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| glycolipid biosynthesis | 2.4.1.46-RXN | EC-2.4.1.46 | monogalactosyldiacylglycerol synthase |
| traumatin and (Z)-3-hexen-1-yl acetate biosynthesis | HYDROHEX-RXN | - | 13(S)-hydroperoxyoctadeca-9,11-dienoate lyase |
| Hydropathy |
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| EST Download unfiltered results here | ||||
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| Hit | Length | Start | End | EValue |
| GT049228 | 349 | 187 | 535 | 0 |
| EX267973 | 342 | 171 | 512 | 0 |
| CV530540 | 293 | 141 | 433 | 0 |
| EX260172 | 299 | 168 | 466 | 0 |
| HO466477 | 382 | 141 | 522 | 0 |
| Sequence Alignments (This image is cropped. Click for full image.) |
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