Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00010413m |
Family | GH9 |
Protein Properties | Length: 498 Molecular Weight: 53137.1 Isoelectric Point: 8.2571 |
Chromosome | Chromosome/Scaffold: 003940 Start: 13472 End: 16896 |
Description | glycosyl hydrolase 9B1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 35 | 481 | 0 |
DYADALHKSILFFEGQRSGRLPPRPAPPVDLTGGYYDAGDNVKFGFPMAFTATLMSWGLIDFGRSFGARVEAAARAAVRWATDYLMKATATPGAVYVQVG DASRDHACWERPEDMDTPRTVYRVDAAHPGSDVAAETAAALAAGSLVFRDADPGYAARLLARAAEVFAFADAHRGAYSGSLRAAVCPCYCDYSGYQDELL WGAAWLHRASRRREYREYIKRNEVALGASDAINEFGWDNKHAGINVLISKEALMGKDEYFQSFRENADNFICGLLPGISGGSGHPQIQYSPGGLLFKVGN SNMQHVTSLSFLLLAYSNYLSHAGARVSCGGGASPVQLRRVAKRQVDYILGDNPLRMSYMVGYGPRYPLRIHHRASSLPSVAAHPARIGCKAGAAYYASP APNPNLLVGAVVGGPSNSTDAFPDARAVFQQSEPTTYINAPLLGLLA |
Full Sequence |
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Protein Sequence Length: 498 Download |
MARPVSTPAR SMAAAVAVAV AVLLAASPAA LAVHDYADAL HKSILFFEGQ RSGRLPPRPA 60 PPVDLTGGYY DAGDNVKFGF PMAFTATLMS WGLIDFGRSF GARVEAAARA AVRWATDYLM 120 KATATPGAVY VQVGDASRDH ACWERPEDMD TPRTVYRVDA AHPGSDVAAE TAAALAAGSL 180 VFRDADPGYA ARLLARAAEV FAFADAHRGA YSGSLRAAVC PCYCDYSGYQ DELLWGAAWL 240 HRASRRREYR EYIKRNEVAL GASDAINEFG WDNKHAGINV LISKEALMGK DEYFQSFREN 300 ADNFICGLLP GISGGSGHPQ IQYSPGGLLF KVGNSNMQHV TSLSFLLLAY SNYLSHAGAR 360 VSCGGGASPV QLRRVAKRQV DYILGDNPLR MSYMVGYGPR YPLRIHHRAS SLPSVAAHPA 420 RIGCKAGAAY YASPAPNPNL LVGAVVGGPS NSTDAFPDAR AVFQQSEPTT YINAPLLGLL 480 AYFAAHPNLE AAQLGRD* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02613 | PLN02613 | 2.0e-151 | 35 | 481 | 466 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 3.0e-155 | 35 | 481 | 472 | + Glycosyl hydrolase family 9. | ||
PLN03009 | PLN03009 | 2.0e-180 | 34 | 488 | 472 | + cellulase | ||
PLN02308 | PLN02308 | 0 | 34 | 489 | 471 | + endoglucanase | ||
PLN02266 | PLN02266 | 0 | 34 | 484 | 466 | + endoglucanase |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACL54781.1 | 0 | 34 | 488 | 27 | 500 | unknown [Zea mays] |
GenBank | EAZ00403.1 | 0 | 12 | 497 | 1 | 497 | hypothetical protein OsI_22418 [Oryza sativa Indica Group] |
RefSeq | NP_001057318.1 | 0 | 12 | 497 | 1 | 497 | Os06g0256900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001136728.1 | 0 | 34 | 488 | 27 | 496 | hypothetical protein LOC100216867 [Zea mays] |
RefSeq | XP_002438182.1 | 0 | 1 | 488 | 57 | 558 | hypothetical protein SORBIDRAFT_10g009270 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 34 | 481 | 3 | 426 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1ksc_A | 0 | 34 | 481 | 3 | 426 | A Chain A, Polygalacturonase From Erwinia Carotovora Ssp. Carotovora |
PDB | 1ks8_A | 0 | 34 | 481 | 3 | 426 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 35 | 481 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 35 | 481 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |