Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00010434m |
Family | GH9 |
Protein Properties | Length: 532 Molecular Weight: 57350 Isoelectric Point: 5.4758 |
Chromosome | Chromosome/Scaffold: 005630 Start: 4733 End: 7534 |
Description | glycosyl hydrolase 9B15 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH9 | 40 | 489 | 0 |
NYSGALAKAILFFEGQRSGRLPANQRVKWRGDSALNDGQTENVNLTGGYYDAGDNVKFGFPMAFSITLLSWSAAEYRDEVAVAGQLRYLRSAIQWGADFL LRAHTSPTTLYTQVGDGNADHQCWERPEDMDTPRTLYKITKNSPGSEAAGEAAAALAAAYLVFRDDRDKTYATQLLAASRSLFDFANNYRGSFQSSCPFY CSYSGFQDELLWASAWLYRATRDRKYLDFLQNNQGGSSNMFSWDNKYPGAQILATQEYLAGRTELEGYKRGLDSFVCAVMPNSGNTQIRTTPGGLLFTSD SVNMQYTATATLLLFIYSKTLSSSGSSTVQCSGASFSPDQISSFAASQVDYILGDNPMGMSYMVGFSSKFPQRIHHRGSSIPSIKALPRKVTCNEGFSSW FPTSDPNPNVHVGAIVGGPDGNDEFPDNRGDSTHSEPAIYINAAFVGACA |
Full Sequence |
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Protein Sequence Length: 532 Download |
MAVKMWVLMA LMMCAGVGLG APDGGAAAGD GRLGGLSSPN YSGALAKAIL FFEGQRSGRL 60 PANQRVKWRG DSALNDGQTE NVNLTGGYYD AGDNVKFGFP MAFSITLLSW SAAEYRDEVA 120 VAGQLRYLRS AIQWGADFLL RAHTSPTTLY TQVGDGNADH QCWERPEDMD TPRTLYKITK 180 NSPGSEAAGE AAAALAAAYL VFRDDRDKTY ATQLLAASRS LFDFANNYRG SFQSSCPFYC 240 SYSGFQDELL WASAWLYRAT RDRKYLDFLQ NNQGGSSNMF SWDNKYPGAQ ILATQEYLAG 300 RTELEGYKRG LDSFVCAVMP NSGNTQIRTT PGGLLFTSDS VNMQYTATAT LLLFIYSKTL 360 SSSGSSTVQC SGASFSPDQI SSFAASQVDY ILGDNPMGMS YMVGFSSKFP QRIHHRGSSI 420 PSIKALPRKV TCNEGFSSWF PTSDPNPNVH VGAIVGGPDG NDEFPDNRGD STHSEPAIYI 480 NAAFVGACAA ALGQNKVQGP VGDIASVISS KYIEQEDTQQ MYGQGLAKIQ P* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02909 | PLN02909 | 5.0e-166 | 40 | 481 | 444 | + Endoglucanase | ||
PLN02308 | PLN02308 | 1.0e-168 | 40 | 481 | 453 | + endoglucanase | ||
PLN02266 | PLN02266 | 2.0e-180 | 37 | 481 | 456 | + endoglucanase | ||
PLN02613 | PLN02613 | 0 | 38 | 510 | 476 | + endoglucanase | ||
pfam00759 | Glyco_hydro_9 | 0 | 40 | 481 | 457 | + Glycosyl hydrolase family 9. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ06862.1 | 0 | 1 | 510 | 1 | 515 | hypothetical protein OsI_29098 [Oryza sativa Indica Group] |
GenBank | EAZ42601.1 | 0 | 1 | 510 | 1 | 493 | hypothetical protein OsJ_27165 [Oryza sativa Japonica Group] |
RefSeq | NP_001061713.1 | 0 | 1 | 510 | 1 | 515 | Os08g0387400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142028.1 | 0 | 1 | 509 | 1 | 508 | hypothetical protein LOC100274182 [Zea mays] |
RefSeq | XP_002444283.1 | 0 | 23 | 507 | 27 | 514 | hypothetical protein SORBIDRAFT_07g019470 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ksd_A | 0 | 40 | 493 | 4 | 432 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1ksc_A | 0 | 40 | 493 | 4 | 432 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
PDB | 1ks8_A | 0 | 40 | 493 | 4 | 432 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_B | 0 | 40 | 489 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |
PDB | 4tf4_A | 0 | 40 | 489 | 5 | 438 | A Chain A, The Structure Of Endoglucanase From Termite, Nasutitermes Takasagoensis, At Ph 2.5. |