| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00010484m |
| Family | GH35 |
| Protein Properties | Length: 805 Molecular Weight: 90076.7 Isoelectric Point: 7.0505 |
| Chromosome | Chromosome/Scaffold: 003912 Start: 3468 End: 8822 |
| Description | glycosyl hydrolase family 35 protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 44 | 347 | 0 |
| LMIDGRRDLFFSGAIHYPRSPPELWPKLIERAKKGGLNTIETYVFWNAHEPEKGKYNFEGRLDLIKYLKMIQDHDMYAVVRIGPFIQAEWNHGGLPYWLR EIDHIIFRANNDAYKKEMETFVRFIVQKLKDAELFASQGGPIILTQIENEYGNIKKDHKTEGDKYLEWAAQMALSTQTGVPWIMCKQSSAPGEVIPTCNG RHCGDTWTLRDKDKPMLWTENWTAQFRAYGDQVAMRSAEDIAYAVLRFFAKGGSMVNYYMYHGGTNFGRTGASYVLTGYYDEAPMDEYGMCKEPKFGHLR DLHN | |||
| Full Sequence |
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| Protein Sequence Length: 805 Download |
| MTAVRAAAVL VAAAALAILL PGWAAAAWTL TKKGTIVTYD ARSLMIDGRR DLFFSGAIHY 60 PRSPPELWPK LIERAKKGGL NTIETYVFWN AHEPEKGKYN FEGRLDLIKY LKMIQDHDMY 120 AVVRIGPFIQ AEWNHGGLPY WLREIDHIIF RANNDAYKKE METFVRFIVQ KLKDAELFAS 180 QGGPIILTQI ENEYGNIKKD HKTEGDKYLE WAAQMALSTQ TGVPWIMCKQ SSAPGEVIPT 240 CNGRHCGDTW TLRDKDKPML WTENWTAQFR AYGDQVAMRS AEDIAYAVLR FFAKGGSMVN 300 YYMYHGGTNF GRTGASYVLT GYYDEAPMDE YGMCKEPKFG HLRDLHNVIR SYQKAFLMGE 360 HSSEMLGHGY EAHTFELPED KLCLSFLSNN NTGEDGTVIF RGEKHYVPSR SVSILVGCKN 420 VVYNTKRVFV QHSERSFHTS EVTSKNNLWE MFSEAVPKYH TTKIRAKEPL EQYNQTKDAT 480 DYLWYTTSFR LESDDLPFRG DIRPVLQVRS SAHSMVGFAN DAFVGTGRGS KQVKGFMFER 540 PVDLKVGVNH ITLLSTAMGM KDSGGELAEV KGGIQECLIQ GLNTGTLDLQ VNGWGHKRYF 600 DEPDGDDIVV LDMSSMGKGM IFVNGEGMGR YWVSYRTLAG TPSQALYHIP RPFLKPKDNL 660 LVVFEEELGK PGGILIQTVT RDDICVLLSE HNPAQIKTWD TDGDKIKLIA EDHSTRGTLT 720 CPPKKTIQEV VFASFGNPEG MCGNFTVGTC HTPNAKQVVE KECLGKPSCV LPVAHDVYGA 780 DINCQSTTAT LGVQVRCGLE KKGA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam02449 | Glyco_hydro_42 | 8.0e-7 | 64 | 195 | 150 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
| pfam02140 | Gal_Lectin | 1.0e-17 | 719 | 797 | 82 | + Galactose binding lectin domain. | ||
| COG1874 | LacA | 6.0e-21 | 37 | 214 | 189 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| pfam01301 | Glyco_hydro_35 | 6.0e-135 | 43 | 349 | 322 | + Glycosyl hydrolases family 35. | ||
| PLN03059 | PLN03059 | 0 | 37 | 797 | 823 | + beta-galactosidase; Provisional | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005529 | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates." [CHEBI:16646, GOC:mah] |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CAG30724.1 | 0 | 26 | 797 | 24 | 825 | putative beta-galactosidase precursor [Hordeum vulgare] |
| GenBank | EEC84965.1 | 0 | 28 | 797 | 27 | 799 | hypothetical protein OsI_32205 [Oryza sativa Indica Group] |
| GenBank | EEE70132.1 | 0 | 28 | 797 | 27 | 830 | hypothetical protein OsJ_30164 [Oryza sativa Japonica Group] |
| Swiss-Prot | Q0IZZ8 | 0 | 28 | 795 | 27 | 828 | BGL12_ORYSJ RecName: Full=Beta-galactosidase 12; Short=Lactase 12; Flags: Precursor |
| RefSeq | XP_002460584.1 | 0 | 29 | 804 | 28 | 803 | hypothetical protein SORBIDRAFT_02g031260 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3d3a_A | 3.9937e-43 | 43 | 345 | 14 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 5e-36 | 46 | 311 | 12 | 284 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_B | 0.0002 | 611 | 667 | 523 | 572 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| PDB | 4e8d_A | 5e-36 | 46 | 311 | 12 | 284 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
