| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00010551m |
| Family | GH35 |
| Protein Properties | Length: 671 Molecular Weight: 75277.1 Isoelectric Point: 6.5101 |
| Chromosome | Chromosome/Scaffold: 003867 Start: 10629 End: 17365 |
| Description | beta-galactosidase 17 |
| View CDS | |
| External Links |
|---|
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| GH35 | 40 | 364 | 0 |
| FMKDGAPFQIVGGDVHYFRIVPEYWKDRLLRAKALGLNTIQTYVPWNLHEPQPQSWKFNGFADLESYLRLAQKLGMLVMLRVGPYICGEWDLGGFPPWLL TIEPALKLRSSDSTYLSLVGRWWGVLLPKVAPLLYRNGGPVIMVQIENEFGSFGDDKNYLHYLVQLARRYLGDDIVLYTTDGGAMGNLKNGSISQDDVFA AVDFETGSNPWPIFRLQKKYNLPGKSAPLTSEFYTGWLTHWGESMATTDATSTAKALKTILCRNGSAVLYMAHGGTNFGFYSGANTGQDEYDYKPDLTSY DYDAPIKEHGDVHNLKYKALRSVIH | |||
| Full Sequence |
|---|
| Protein Sequence Length: 671 Download |
| MASDGAFHNL LLLAVLLCLA LTSSVGGEAS RRFWIENDTF MKDGAPFQIV GGDVHYFRIV 60 PEYWKDRLLR AKALGLNTIQ TYVPWNLHEP QPQSWKFNGF ADLESYLRLA QKLGMLVMLR 120 VGPYICGEWD LGGFPPWLLT IEPALKLRSS DSTYLSLVGR WWGVLLPKVA PLLYRNGGPV 180 IMVQIENEFG SFGDDKNYLH YLVQLARRYL GDDIVLYTTD GGAMGNLKNG SISQDDVFAA 240 VDFETGSNPW PIFRLQKKYN LPGKSAPLTS EFYTGWLTHW GESMATTDAT STAKALKTIL 300 CRNGSAVLYM AHGGTNFGFY SGANTGQDEY DYKPDLTSYD YDAPIKEHGD VHNLKYKALR 360 SVIHECIGTP LHPLPSDIEK ANYGLVKLQK VASLFDIIDN ISDPLKGVVS EHPLYMEQIG 420 QMFGFLLYIS EYQGKLPSSI LSIPKVHDRA QVFLSCSTDS VRNPRYAGAI ERWSSKTLEI 480 PNLGCPANTS LYILVENMGR INYGPYIFDR KGILSPIQID GVTLCHWKMY PLTFNSLDNL 540 PKIQLVTQMP DVRASKVSII HGHSEKKFQE SSFYLNEPEF YEGHFHIDSE SEIKDTFISF 600 RGWNKGVVFV NNFNIGRFWP ARGPQCALYV PGPILRPGDN VIVIFELHGP NPELTVNLVT 660 DPDFTCGPKQ * |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
 | ||||||||
| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam13364 | BetaGal_dom4_5 | 4.0e-5 | 580 | 644 | 67 | + Beta-galactosidase jelly roll domain. This domain is found in beta galactosidase enzymes. It has a jelly roll fold. | ||
| COG1874 | LacA | 1.0e-31 | 38 | 650 | 659 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
| PLN03059 | PLN03059 | 3.0e-40 | 49 | 367 | 332 | + beta-galactosidase; Provisional | ||
| pfam01301 | Glyco_hydro_35 | 2.0e-141 | 39 | 365 | 328 | + Glycosyl hydrolases family 35. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0004565 | beta-galactosidase activity |
| GO:0005975 | carbohydrate metabolic process |
| GO:0009341 | beta-galactosidase complex |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | AAV59405.1 | 0 | 22 | 667 | 23 | 660 | putative beta-galactosidase [Oryza sativa Japonica Group] |
| GenBank | ACR37865.1 | 0 | 1 | 670 | 1 | 672 | unknown [Zea mays] |
| RefSeq | NP_001056172.1 | 0 | 22 | 667 | 23 | 672 | Os05g0539400 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | XP_002327549.1 | 0 | 31 | 670 | 1 | 637 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002441448.1 | 0 | 1 | 670 | 1 | 608 | hypothetical protein SORBIDRAFT_09g026870 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3thd_D | 0 | 29 | 661 | 5 | 617 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3thd_C | 0 | 29 | 661 | 5 | 617 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3thd_B | 0 | 29 | 661 | 5 | 617 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3thd_A | 0 | 29 | 661 | 5 | 617 | A Chain A, Arabidopsis Thaliana Peroxidase A2 |
| PDB | 3thc_D | 0 | 29 | 661 | 5 | 617 | A Chain A, Crystal Structure Of Human Beta-Galactosidase In Complex With Galactose |
| Metabolic Pathways | |||
|---|---|---|---|
| Pathway Name | Reaction | EC | Protein Name |
| lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |
