| Basic Information | |
|---|---|
| Species | Panicum virgatum |
| Cazyme ID | Pavirv00010845m |
| Family | GH5 |
| Protein Properties | Length: 565 Molecular Weight: 60553 Isoelectric Point: 6.5907 |
| Chromosome | Chromosome/Scaffold: 088825 Start: 394 End: 2687 |
| Description | Cellulase (glycosyl hydrolase family 5) protein |
| View CDS | |
| External Links |
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| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| GH5 | 42 | 356 | 1.90016e-42 |
| VVDPAGRRVKLACVNWPSHLEPVVTEGLERQPVGAIAGMVASLGFNCVRLTYPIALATNASLSALTVRQSLLAHGLAETAGGVEVNNPGFLDLTLMDSLK AVVNALGEKDVLVILDNHVSRPGWCCANDDGNGFFGDRDFDPDVWVDGLGTMATIFADVPNVVGMSLRNELRGPRQNPEDWYTYMQRGAEAVHAANPRAL VIMGGLSYDYDLSFLAARQVEVSFAAEGKLVFEVHWYSFSDARAWETGNANEVCARAARDFERRGGFLLARGFPLFLSEFGADLRGGDLRGNRYFPCAAA VAAEHDLDWAYWALQ | |||
| Full Sequence |
|---|
| Protein Sequence Length: 565 Download |
| MPRITSRRAA PRLLLLVLLL AAGHREPPRA AAVTLSTSSR WVVDPAGRRV KLACVNWPSH 60 LEPVVTEGLE RQPVGAIAGM VASLGFNCVR LTYPIALATN ASLSALTVRQ SLLAHGLAET 120 AGGVEVNNPG FLDLTLMDSL KAVVNALGEK DVLVILDNHV SRPGWCCAND DGNGFFGDRD 180 FDPDVWVDGL GTMATIFADV PNVVGMSLRN ELRGPRQNPE DWYTYMQRGA EAVHAANPRA 240 LVIMGGLSYD YDLSFLAARQ VEVSFAAEGK LVFEVHWYSF SDARAWETGN ANEVCARAAR 300 DFERRGGFLL ARGFPLFLSE FGADLRGGDL RGNRYFPCAA AVAAEHDLDW AYWALQGSYA 360 LRQGVAGMDE VYGVLDWSWS KVRNETVLPR IQALQRPIQG PGYGEALPYT VLFHPVTGLC 420 AAAAAANTLE LRPCNETDAW AYAPPASTLV LRDAAAAGLP CLRAEGRGLP ARLGAKACGD 480 ALSTWRLASD SGMHVAVEPP PEMGGGGGGG GMLCLDVGAD GRSVVTNPCA CLRGDGTCDP 540 ERQWFKLVTS TRRVARRPRA RLVA* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00150 | Cellulase | 1.0e-14 | 81 | 355 | 281 | + Cellulase (glycosyl hydrolase family 5). | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | EAY86525.1 | 0 | 12 | 552 | 4 | 563 | hypothetical protein OsI_07905 [Oryza sativa Indica Group] |
| GenBank | EEC77495.1 | 0 | 40 | 555 | 36 | 550 | hypothetical protein OsI_16343 [Oryza sativa Indica Group] |
| GenBank | EEE61202.1 | 0 | 40 | 555 | 36 | 550 | hypothetical protein OsJ_15212 [Oryza sativa Japonica Group] |
| RefSeq | XP_002446675.1 | 0 | 34 | 557 | 37 | 567 | hypothetical protein SORBIDRAFT_06g020270 [Sorghum bicolor] |
| RefSeq | XP_002452393.1 | 0 | 23 | 558 | 22 | 566 | hypothetical protein SORBIDRAFT_04g024910 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 1vrx_B | 0.0000000006 | 37 | 326 | 8 | 288 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1vrx_A | 0.0000000006 | 37 | 326 | 8 | 288 | A Chain A, Endocellulase E1 From Acidothermus Cellulolyticus Mutant Y245g |
| PDB | 1ece_B | 0.0000000008 | 37 | 326 | 8 | 288 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 1ece_A | 0.0000000008 | 37 | 326 | 8 | 288 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
| PDB | 3pzv_D | 0.0003 | 120 | 323 | 92 | 255 | A Chain A, Acidothermus Cellulolyticus Endocellulase E1 Catalytic Domain In Complex With A Cellotetraose |
