Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00011146m |
Family | GT20 |
Protein Properties | Length: 526 Molecular Weight: 58120.2 Isoelectric Point: 4.8526 |
Chromosome | Chromosome/Scaffold: 088577 Start: 1070 End: 4010 |
Description | trehalose phosphate synthase |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT20 | 2 | 210 | 0 |
AGRKVLLGVDDIDLFKGIDLKLSAMEKLLESQKGLRGRVVLVQINNPARSPGRDIDAVRAEVKAMRDRINARFSLPGYDPIVLIDDPLTMHEKLAFYTSA DICIVTAVRDGLNRIPYIYTACRQEGPLASGVAGAPRESAIVLSEFVGCSPSLSGAVRVNPWNVDDVADGMESALLLDVRDRQMRQEKHYKYVITHDIAY WGRSLDQDL |
Full Sequence |
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Protein Sequence Length: 526 Download |
FAGRKVLLGV DDIDLFKGID LKLSAMEKLL ESQKGLRGRV VLVQINNPAR SPGRDIDAVR 60 AEVKAMRDRI NARFSLPGYD PIVLIDDPLT MHEKLAFYTS ADICIVTAVR DGLNRIPYIY 120 TACRQEGPLA SGVAGAPRES AIVLSEFVGC SPSLSGAVRV NPWNVDDVAD GMESALLLDV 180 RDRQMRQEKH YKYVITHDIA YWGRSLDQDL LRAGEDHASM NILSVGFAMS SRIVVLGPNF 240 QKLSPGDINP SYHRTCNRLI LLDYDGTVMP EGVTVRYPSQ ELIRVLNELC SDPKNTVFVV 300 SGRGKDELAE WLAPCERLGI SAEHGYFTRW SRDSPWESPN LVIGLDWKSL VEPVMKHYTD 360 VTDGSYIEAK ETALVWHYEE ADPDFGSCQA KDLQDHLLSV LAKEPVCVKS GHKIVEVNPQ 420 DVGKGIAVRN LIATMGARGS LPDFILCVGD DRSDEDMFAA ITKPSSNFAF QESAEIFACT 480 LGNKPSLAKY YLEDSDDVLK MLKGLMDSSR PGGALQTQVF EDPFE* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03064 | PLN03064 | 1.0e-73 | 1 | 458 | 487 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
pfam02358 | Trehalose_PPase | 3.0e-80 | 261 | 496 | 241 | + Trehalose-phosphatase. This family consist of trehalose-phosphatases EC:3.1.3.12 these enzyme catalyze the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. The aligned region is present in trehalose-phosphatases and comprises the entire length of the protein it is also found in the C-terminus of trehalose-6-phosphate synthase EC:2.4.1.15 adjacent to the trehalose-6-phosphate synthase domain - pfam00982. It would appear that the two equivalent genes in the E. coli otsBA operon otsA the trehalose-6-phosphate synthase and otsB trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. | ||
PLN03063 | PLN03063 | 3.0e-84 | 1 | 505 | 549 | + alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | ||
PRK14501 | PRK14501 | 9.0e-106 | 1 | 508 | 515 | + putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | ||
PLN02205 | PLN02205 | 0 | 3 | 509 | 511 | + alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
Gene Ontology | |
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GO Term | Description |
GO:0003824 | catalytic activity |
GO:0005992 | trehalose biosynthetic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN35749.1 | 0 | 1 | 517 | 24 | 545 | unknown [Zea mays] |
GenBank | EAZ07161.1 | 0 | 1 | 508 | 300 | 806 | hypothetical protein OsI_29408 [Oryza sativa Indica Group] |
RefSeq | NP_001061925.1 | 0 | 1 | 508 | 300 | 806 | Os08g0445700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002444439.1 | 0 | 1 | 523 | 293 | 823 | hypothetical protein SORBIDRAFT_07g021920 [Sorghum bicolor] |
RefSeq | XP_002452959.1 | 0 | 1 | 519 | 324 | 843 | hypothetical protein SORBIDRAFT_04g035560 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gz5_D | 6e-18 | 7 | 210 | 257 | 450 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_C | 6e-18 | 7 | 210 | 257 | 450 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_B | 6e-18 | 7 | 210 | 257 | 450 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 1gz5_A | 6e-18 | 7 | 210 | 257 | 450 | A Chain A, Trehalose-6-Phosphate Synthase. Otsa |
PDB | 2wtx_D | 6e-18 | 7 | 210 | 258 | 451 | A Chain A, Insight Into The Mechanism Of Enzymatic Glycosyltransfer With Retention Through The Synthesis And Analysis Of Bisubstrate Glycomimetics Of Trehalose-6-Phosphate Synthase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
trehalose biosynthesis I | TREHALOSE6PSYN-RXN | EC-2.4.1.15 | α,α-trehalose-phosphate synthase (UDP-forming) |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO777775 | 508 | 3 | 505 | 0 |
HO797286 | 467 | 47 | 509 | 0 |
FL798974 | 243 | 143 | 385 | 0 |
HO795511 | 468 | 44 | 509 | 0 |
HO455803 | 486 | 47 | 510 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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