y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00011249m |
Family | GT75 |
Protein Properties | Length: 365 Molecular Weight: 41268.5 Isoelectric Point: 5.9844 |
Chromosome | Chromosome/Scaffold: 083282 Start: 990 End: 3482 |
Description | reversibly glycosylated polypeptide 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT75 | 18 | 353 | 0 |
LKDELDIVIPTIRNLDFLEMWRPFFQPYHLIIVQDGDPTKTIKVPEGFDYELYNRNDINRILGPKASCISFKDSACRCFGYMVSKKKYIYTIDDDCFVAK DPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYREGADFVRGYPFSLREGAHTAVSHGLWLNIPDYDAPTQLVKPKERNERYVDAVMTIPNGTLFPMCGM NLAFDRDLIGPAMYFGLMGDGQPIGRYDDMWAGWCVKVICDHLSLGVKTGLPYIWHSKASNPFVNLKKEYKGIFWQEDIIPFFQNVTIPKECDTVQKCYI YLSGQVKEKLGKIDPYFVKLADAMVTWIEAWDELNP |
Full Sequence |
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Protein Sequence Length: 365 Download |
MAGTVTVPGA NVPSTPLLKD ELDIVIPTIR NLDFLEMWRP FFQPYHLIIV QDGDPTKTIK 60 VPEGFDYELY NRNDINRILG PKASCISFKD SACRCFGYMV SKKKYIYTID DDCFVAKDPS 120 GKDINALEQH IKNLLSPSTP FFFNTLYDPY REGADFVRGY PFSLREGAHT AVSHGLWLNI 180 PDYDAPTQLV KPKERNERYV DAVMTIPNGT LFPMCGMNLA FDRDLIGPAM YFGLMGDGQP 240 IGRYDDMWAG WCVKVICDHL SLGVKTGLPY IWHSKASNPF VNLKKEYKGI FWQEDIIPFF 300 QNVTIPKECD TVQKCYIYLS GQVKEKLGKI DPYFVKLADA MVTWIEAWDE LNPTTAAAAN 360 GKAK* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN03180 | PLN03180 | 0 | 10 | 355 | 346 | + reversibly glycosylated polypeptide; Provisional | ||
pfam03214 | RGP | 0 | 14 | 355 | 347 | + Reversibly glycosylated polypeptide. |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0007047 | : GO:0044234 |
GO:0008466 | glycogenin glucosyltransferase activity |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030054 | cell junction |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF84514.1 | 0 | 1 | 364 | 1 | 364 | unknown [Zea mays] |
RefSeq | NP_001050617.1 | 0 | 1 | 364 | 1 | 364 | Os03g0599800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105598.1 | 0 | 1 | 364 | 1 | 364 | golgi associated protein se-wap41 [Zea mays] |
RefSeq | NP_001142134.1 | 0 | 1 | 364 | 1 | 364 | hypothetical protein LOC100274298 [Zea mays] |
RefSeq | XP_002464260.1 | 0 | 1 | 364 | 1 | 364 | hypothetical protein SORBIDRAFT_01g015090 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CX109310 | 355 | 1 | 355 | 0 |
HO810375 | 355 | 1 | 355 | 0 |
HO852574 | 347 | 9 | 355 | 0 |
HO779006 | 341 | 15 | 355 | 0 |
CU575244 | 343 | 10 | 352 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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