y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00011281m |
Family | CE10 |
Protein Properties | Length: 251 Molecular Weight: 26939.4 Isoelectric Point: 6.3056 |
Chromosome | Chromosome/Scaffold: 087518 Start: 3318 End: 4070 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 10 | 248 | 2.1e-36 |
GGFVVGSPARPSTHNYLVDLVARSGAIVVSVYYRLAPEHKLPAAYDDGWAGLRWAATLGGGEEPWLLDHADLTRVFLVGCSAGANIAHNTAVRASAPGAL PDGVALRGLALVHPYFTGREAVGGEVAFGPEIRGYMDRTWRFVVSETVGLDDPRVCPFVDDAARRASAGIPCERVLVCVAENDFLLRERGLWYHRELKAS GYAGELEIFESKGVGHAFHFDLLGSEQGVQLQERTVAFI |
Full Sequence |
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Protein Sequence Length: 251 Download |
SRSSSTSTVG GFVVGSPARP STHNYLVDLV ARSGAIVVSV YYRLAPEHKL PAAYDDGWAG 60 LRWAATLGGG EEPWLLDHAD LTRVFLVGCS AGANIAHNTA VRASAPGALP DGVALRGLAL 120 VHPYFTGREA VGGEVAFGPE IRGYMDRTWR FVVSETVGLD DPRVCPFVDD AARRASAGIP 180 CERVLVCVAE NDFLLRERGL WYHRELKASG YAGELEIFES KGVGHAFHFD LLGSEQGVQL 240 QERTVAFINK * 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
smart00824 | PKS_TE | 0.002 | 75 | 159 | 85 | + Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa. | ||
COG0657 | Aes | 1.0e-21 | 20 | 249 | 233 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 3.0e-40 | 23 | 229 | 210 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD35310.1 | 0 | 10 | 250 | 78 | 319 | putative PrMC3 [Oryza sativa Japonica Group] |
GenBank | EEE65327.1 | 0 | 10 | 250 | 636 | 877 | hypothetical protein OsJ_20585 [Oryza sativa Japonica Group] |
RefSeq | NP_001057132.1 | 0 | 10 | 250 | 89 | 329 | Os06g0214800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149797.1 | 0 | 10 | 250 | 82 | 330 | LOC100283424 [Zea mays] |
RefSeq | NP_001150234.1 | 0 | 10 | 250 | 90 | 330 | gibberellin receptor GID1L2 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 4e-22 | 10 | 151 | 92 | 233 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 2o7r_A | 4e-22 | 10 | 151 | 92 | 233 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 9e-21 | 10 | 224 | 120 | 326 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 9e-21 | 10 | 224 | 120 | 326 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 9e-21 | 10 | 224 | 120 | 326 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CK369154 | 223 | 26 | 248 | 0 |
FL730946 | 195 | 17 | 211 | 0 |
FL896149 | 181 | 71 | 251 | 0 |
FL896150 | 183 | 17 | 199 | 0 |
FL896150 | 16 | 197 | 212 | 0.94 |
Sequence Alignments (This image is cropped. Click for full image.) |
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