Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00011407m |
Family | CE10 |
Protein Properties | Length: 232 Molecular Weight: 25282.4 Isoelectric Point: 8.1947 |
Chromosome | Chromosome/Scaffold: 088956 Start: 3308 End: 4003 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 10 | 221 | 2.1e-35 |
LNAVSAKARVVAVSVEYRLAPEHRLPAAYDDSWRALNWVARNAAGSGPEPWLRDRGNLSRLFVAGDSAGANIAHNMAMRAGTEEGGLDGGAAIAGLLLLD PYFWGKKPVAGETTDRATRRQYEATWSFICGGRYGIDDPLVNPLSAELRRLACSRVAVTTSGLDDFRPRGLAYAAALRNSGWGGEVEQYETPGERHVYFL DRPKDPNSVKEL |
Full Sequence |
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Protein Sequence Length: 232 Download |
RLTPLYHAYL NAVSAKARVV AVSVEYRLAP EHRLPAAYDD SWRALNWVAR NAAGSGPEPW 60 LRDRGNLSRL FVAGDSAGAN IAHNMAMRAG TEEGGLDGGA AIAGLLLLDP YFWGKKPVAG 120 ETTDRATRRQ YEATWSFICG GRYGIDDPLV NPLSAELRRL ACSRVAVTTS GLDDFRPRGL 180 AYAAALRNSG WGGEVEQYET PGERHVYFLD RPKDPNSVKE LAFVTGFLSR E* 240 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK10162 | PRK10162 | 0.009 | 25 | 82 | 58 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 7.0e-16 | 26 | 231 | 210 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 7.0e-31 | 25 | 209 | 186 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD09342.1 | 0 | 2 | 229 | 115 | 343 | putative PrMC3 [Oryza sativa Japonica Group] |
GenBank | EAZ45013.1 | 0 | 2 | 231 | 177 | 408 | hypothetical protein OsJ_29652 [Oryza sativa Japonica Group] |
RefSeq | NP_001062031.1 | 0 | 2 | 229 | 129 | 357 | Os08g0474800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001063398.1 | 0 | 2 | 231 | 149 | 380 | Os09g0462100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151232.1 | 0 | 2 | 231 | 149 | 379 | gibberellin receptor GID1L2 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ed1_F | 3e-23 | 3 | 200 | 130 | 322 | A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme |
PDB | 3ed1_E | 3e-23 | 3 | 200 | 130 | 322 | A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme |
PDB | 3ed1_D | 3e-23 | 3 | 200 | 130 | 322 | A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme |
PDB | 3ed1_C | 3e-23 | 3 | 200 | 130 | 322 | A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme |
PDB | 3ed1_B | 3e-23 | 3 | 200 | 130 | 322 | A Chain A, The X-Ray Crystallographic Structure Of Branching Enzyme |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EE170438 | 225 | 2 | 223 | 0 |
FF342085 | 226 | 2 | 223 | 0 |
EG391769 | 226 | 2 | 223 | 0 |
FF340828 | 224 | 4 | 223 | 0 |
EG379570 | 225 | 2 | 223 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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