CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00011651m
FamilyGH16
Protein PropertiesLength: 283 Molecular Weight: 31501.2 Isoelectric Point: 6.5097
ChromosomeChromosome/Scaffold: 085257 Start: 2970 End: 4152
Descriptionxyloglucan endotransglucosylase/hydrolase 25
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16322041.8e-25
  TDGHVRADYNAQGQQVTSLILDRQSGGAFYSRQKYLYGVFSIQMKLIRGNSAGTVTSFYLTSGDGPGHDEIDMEFMGNSSGEPVVLNTNVWAAGDGKKEQ
  QFYLWFDPAADFHTYTIIWNDRNVIFKVDDLFIRSFRRHADLPYPGVKPMSVHATLWDGSFWATQQGKVKVDW
Full Sequence
Protein Sequence     Length: 283     Download
MAARRALAAA VAVALLAASA SADSWLYEKF TTDGHVRADY NAQGQQVTSL ILDRQSGGAF    60
YSRQKYLYGV FSIQMKLIRG NSAGTVTSFY LTSGDGPGHD EIDMEFMGNS SGEPVVLNTN    120
VWAAGDGKKE QQFYLWFDPA ADFHTYTIIW NDRNVIFKVD DLFIRSFRRH ADLPYPGVKP    180
MSVHATLWDG SFWATQQGKV KVDWAGAPFV VSYRGYSADA CTPDGDGRPL SCPAGTDRWM    240
TRQLDAAEWG TVAWARKNYM HYNYCEDGWR FPQGFPAECS RN* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd00413Glyco_hydrolase_162.0e-1649204174+
pfam06955XET_C2.0e-1723227951+
pfam00722Glyco_hydro_164.0e-6044206164+
PLN03161PLN031617.0e-7050281239+
cd02176GH16_XET9.0e-11927279258+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACG39534.10628214290xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
GenBankACS13757.102328123282xyloglucan xyloglucosyl transferase [Hordeum vulgare]
RefSeqNP_001151500.1032827286LOC100285134 [Zea mays]
RefSeqXP_002446425.102128220277hypothetical protein SORBIDRAFT_06g015930 [Sorghum bicolor]
RefSeqXP_002447796.102328225287hypothetical protein SORBIDRAFT_06g015940 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B04428235275A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)
PDB1un1_A04428235275A Chain A, Family Gh5 Endo-Beta-Mannanase From Lycopersicon Esculentum (Tomato)
PDB1umz_B04428235275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A04428235275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2uwb_B03527032259A Chain A, Crystal Structure Of The Nasturtium Seedling Mutant Xyloglucanase Isoform Nxg1-Delta-Yniig
Signal Peptide
Cleavage Site
22
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CO456605254232760
EE174431254232760
FE633116225592830
EC902220242232640
DR963014242232640
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00014997mPavirv00060809mPavirv00011489mPavirv00022766mPavirv00032512m
Pavirv00065073mPavirv00039266mPavirv00018963mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015880.1Sb06g015940.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny