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Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00011800m |
Family | GH1 |
Protein Properties | Length: 377 Molecular Weight: 42967.4 Isoelectric Point: 6.9037 |
Chromosome | Chromosome/Scaffold: 085066 Start: 321 End: 4115 |
Description | beta glucosidase 17 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 2 | 373 | 0 |
IVDGSNGDVADDQYHRYKEDVNIMKDIGMDAYRFSISWTRILPNGSLSGGVNGEAVSYYNNLINELLSKGLQPFVTIFHWDSPQTLEDKYKGFHSPNIID DYKSYAEVCFREFGDRVKHWITFNEPFSFCQSGYASGVFAPSRCSSWEQGNCSVGDSGTEPYTACHHQLLAHGETVRLYKEKYQALQKGKIGITLMSHWF VPISSSKYDKAAARRSMDFMLGWFMHPLIKGEYPLTMRKLVGNRLPKFSREQSELVKGAFDFIGLNYYTAYFAENVPPSNSLNYSYNTDPRANLTGARNG VPIGPTSASTWYFIFYIYPKGLYELLLYVKEKYGNPTVYITENGVPEINNSSLTLQEALKDDTRIQYYHDHL |
Full Sequence |
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Protein Sequence Length: 377 Download |
KIVDGSNGDV ADDQYHRYKE DVNIMKDIGM DAYRFSISWT RILPNGSLSG GVNGEAVSYY 60 NNLINELLSK GLQPFVTIFH WDSPQTLEDK YKGFHSPNII DDYKSYAEVC FREFGDRVKH 120 WITFNEPFSF CQSGYASGVF APSRCSSWEQ GNCSVGDSGT EPYTACHHQL LAHGETVRLY 180 KEKYQALQKG KIGITLMSHW FVPISSSKYD KAAARRSMDF MLGWFMHPLI KGEYPLTMRK 240 LVGNRLPKFS REQSELVKGA FDFIGLNYYT AYFAENVPPS NSLNYSYNTD PRANLTGARN 300 GVPIGPTSAS TWYFIFYIYP KGLYELLLYV KEKYGNPTVY ITENGVPEIN NSSLTLQEAL 360 KDDTRIQYYH DHLLPY* 420 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02998 | PLN02998 | 1.0e-95 | 8 | 373 | 367 | + beta-glucosidase | ||
TIGR03356 | BGL | 8.0e-97 | 1 | 373 | 374 | + beta-galactosidase. | ||
PLN02814 | PLN02814 | 3.0e-98 | 4 | 368 | 368 | + beta-glucosidase | ||
PLN02849 | PLN02849 | 8.0e-103 | 4 | 373 | 372 | + beta-glucosidase | ||
pfam00232 | Glyco_hydro_1 | 3.0e-125 | 1 | 373 | 378 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH66812.1 | 0 | 1 | 374 | 78 | 448 | OSIGBa0135C13.7 [Oryza sativa (indica cultivar-group)] |
EMBL | CAH67305.1 | 0 | 1 | 374 | 74 | 444 | OSIGBa0106G07.1 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001053071.1 | 0 | 1 | 374 | 74 | 444 | Os04g0474900 [Oryza sativa (japonica cultivar-group)] |
Swiss-Prot | Q7XKV4 | 0 | 1 | 374 | 78 | 448 | BGL12_ORYSJ RecName: Full=Beta-glucosidase 12; Short=Os4bglu12; Flags: Precursor |
RefSeq | XP_002448027.1 | 0 | 1 | 374 | 80 | 450 | hypothetical protein SORBIDRAFT_06g019840 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 1 | 374 | 73 | 443 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
PDB | 3ptq_A | 0 | 1 | 374 | 73 | 443 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
PDB | 3ptm_B | 0 | 1 | 374 | 73 | 443 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
PDB | 3ptm_A | 0 | 1 | 374 | 73 | 443 | A Chain A, Crystal Structure Of 1,2-A-L-Fucosidase From Bifidobacterium Bifidum In Complexes With Products |
PDB | 3ptk_B | 0 | 1 | 374 | 73 | 443 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CB677500 | 248 | 1 | 248 | 0 |
CB666552 | 257 | 55 | 310 | 0 |
EE590590 | 356 | 18 | 373 | 0 |
HO318461 | 238 | 28 | 265 | 0 |
GO593830 | 235 | 1 | 235 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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