y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00011881m |
Family | GH1 |
Protein Properties | Length: 375 Molecular Weight: 42854.1 Isoelectric Point: 7.2136 |
Chromosome | Chromosome/Scaffold: 082083 Start: 340 End: 4125 |
Description | beta glucosidase 17 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH1 | 5 | 373 | 0 |
GGVNKEGVRYYNNLIDELLLKGVQPFVTLFHWDSPQALEDKYKGFLSPNIINDYKDYAEVCFKEFGDRVKHWTTFNEPWSFCSGGYASGRFAPGRCSPWE QGKCSAGDSGTEPYTVCHHQILAHAETVRLYKEKYQAVQKGSVGITLVSNWFVPFSRSKSNNDAAKRAIDFMLGWFMDPLTRGDYPLSMRTLVGNRLPQF TKEQSELVKGAFDFIGLNYYTANYADNLPPSNGLNVTYNTDARANLTAWLFVYPQGFRELLLYVKENYGNPTVYITENGVDEANNQNLSLQEALKDDARI EFYHKHLLALRSAVSDGSNVKGYFAWSLLDNFEWVDGYTVRFGINFVDYNDGYKRYPKKSAHWFREFLK |
Full Sequence |
---|
Protein Sequence Length: 375 Download |
GSMNGGVNKE GVRYYNNLID ELLLKGVQPF VTLFHWDSPQ ALEDKYKGFL SPNIINDYKD 60 YAEVCFKEFG DRVKHWTTFN EPWSFCSGGY ASGRFAPGRC SPWEQGKCSA GDSGTEPYTV 120 CHHQILAHAE TVRLYKEKYQ AVQKGSVGIT LVSNWFVPFS RSKSNNDAAK RAIDFMLGWF 180 MDPLTRGDYP LSMRTLVGNR LPQFTKEQSE LVKGAFDFIG LNYYTANYAD NLPPSNGLNV 240 TYNTDARANL TAWLFVYPQG FRELLLYVKE NYGNPTVYIT ENGVDEANNQ NLSLQEALKD 300 DARIEFYHKH LLALRSAVSD GSNVKGYFAW SLLDNFEWVD GYTVRFGINF VDYNDGYKRY 360 PKKSAHWFRE FLKK* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG2723 | BglB | 7.0e-106 | 7 | 370 | 378 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
PLN02998 | PLN02998 | 7.0e-107 | 2 | 373 | 382 | + beta-glucosidase | ||
TIGR03356 | BGL | 2.0e-109 | 5 | 368 | 368 | + beta-galactosidase. | ||
PLN02849 | PLN02849 | 1.0e-113 | 5 | 373 | 377 | + beta-glucosidase | ||
pfam00232 | Glyco_hydro_1 | 6.0e-140 | 4 | 374 | 388 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAG94781.1 | 0 | 1 | 374 | 4 | 391 | unnamed protein product [Oryza sativa Japonica Group] |
EMBL | CAH66812.1 | 0 | 1 | 374 | 123 | 510 | OSIGBa0135C13.7 [Oryza sativa (indica cultivar-group)] |
RefSeq | NP_001053070.1 | 0 | 1 | 374 | 8 | 395 | Os04g0474800 [Oryza sativa (japonica cultivar-group)] |
Swiss-Prot | Q7XKV4 | 0 | 1 | 374 | 123 | 510 | BGL12_ORYSJ RecName: Full=Beta-glucosidase 12; Short=Os4bglu12; Flags: Precursor |
RefSeq | XP_002448028.1 | 0 | 1 | 374 | 111 | 517 | hypothetical protein SORBIDRAFT_06g019850 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ptq_B | 0 | 1 | 374 | 118 | 505 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3ptq_A | 0 | 1 | 374 | 118 | 505 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3ptm_B | 0 | 1 | 374 | 118 | 505 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3ptm_A | 0 | 1 | 374 | 118 | 505 | A Chain A, Crystal Structure Of Desr, A Beta-glucosidase From Streptomyces Venezuelae In Complex With D-glucose. |
PDB | 3ptk_B | 0 | 1 | 374 | 118 | 505 | A Chain A, The Crystal Structure Of Rice (Oryza Sativa L.) Os4bglu12 |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
JG913334 | 293 | 88 | 366 | 0 |
HO318461 | 220 | 1 | 220 | 0 |
EE590590 | 388 | 1 | 374 | 0 |
CB666552 | 245 | 9 | 252 | 0 |
DY674873 | 304 | 27 | 316 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|