Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00011924m |
Family | AA1 |
Protein Properties | Length: 501 Molecular Weight: 54053.4 Isoelectric Point: 5.8094 |
Chromosome | Chromosome/Scaffold: 087805 Start: 1177 End: 4044 |
Description | SKU5 similar 5 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 46 | 488 | 0 |
QQGILINGQFPGPTLECRTNDNLIINVRNSLPDPFLLSWNGLQQRKNSWQDGVSGTNCPIPPGQNFTYRMQAKDQIGSFFYFPSLAFHKAAGGFGAIRIH SRPLIPVPFPSPADEFTVLIGDWYTTSHKALQDLLDSGKELPPPDGVLINGKRSPNGSDFNVEQGKTYRLRISNVGLQSTLNLLIQEHCMTLVEVEGTHT VQNSYTSVDVHAGQSLSVLFTADRSARDYRVVVSTRFTGTTLRSTAVIRYAGSSGPAFEPLPAAAGPSDDDVDFSLNQVRSIRTNLTASAARPNPQGSYH YSSINVTRTVRLASSAGPAAGAGGGGKLRYAVNGVSFAEADTPLKLADYFNISGVFRLGGIPDAPPPAAATGEVRSETAVMGSDHRSFVEVVLENGEDGV QSWHLDGHSVFVVGMDVGTWSDRSRDGYNLVDAVSRCTVQVYP |
Full Sequence |
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Protein Sequence Length: 501 Download |
MAGSMERALF FACVCLLVNS AWAEDPYRFF DWDISYGEIS PLGVPQQGIL INGQFPGPTL 60 ECRTNDNLII NVRNSLPDPF LLSWNGLQQR KNSWQDGVSG TNCPIPPGQN FTYRMQAKDQ 120 IGSFFYFPSL AFHKAAGGFG AIRIHSRPLI PVPFPSPADE FTVLIGDWYT TSHKALQDLL 180 DSGKELPPPD GVLINGKRSP NGSDFNVEQG KTYRLRISNV GLQSTLNLLI QEHCMTLVEV 240 EGTHTVQNSY TSVDVHAGQS LSVLFTADRS ARDYRVVVST RFTGTTLRST AVIRYAGSSG 300 PAFEPLPAAA GPSDDDVDFS LNQVRSIRTN LTASAARPNP QGSYHYSSIN VTRTVRLASS 360 AGPAAGAGGG GKLRYAVNGV SFAEADTPLK LADYFNISGV FRLGGIPDAP PPAAATGEVR 420 SETAVMGSDH RSFVEVVLEN GEDGVQSWHL DGHSVFVVGM DVGTWSDRSR DGYNLVDAVS 480 RCTVQVYPSR VDGGFGGAWT T |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02168 | PLN02168 | 4.0e-176 | 11 | 488 | 487 | + copper ion binding / pectinesterase | ||
PLN02354 | PLN02354 | 0 | 5 | 488 | 492 | + copper ion binding / oxidoreductase | ||
PLN02991 | PLN02991 | 0 | 4 | 488 | 485 | + oxidoreductase | ||
PLN02835 | PLN02835 | 0 | 1 | 501 | 503 | + oxidoreductase | ||
PLN02792 | PLN02792 | 0 | 23 | 488 | 467 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAH67167.1 | 0 | 8 | 488 | 9 | 482 | H0211B05.4 [Oryza sativa (indica cultivar-group)] |
GenBank | EEC77800.1 | 0 | 8 | 488 | 3 | 496 | hypothetical protein OsI_16980 [Oryza sativa Indica Group] |
GenBank | EEE61490.1 | 0 | 8 | 488 | 3 | 496 | hypothetical protein OsJ_15776 [Oryza sativa Japonica Group] |
RefSeq | NP_001053555.1 | 0 | 8 | 488 | 9 | 482 | Os04g0561900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002448327.1 | 0 | 5 | 488 | 1 | 501 | hypothetical protein SORBIDRAFT_06g025300 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 2e-39 | 28 | 488 | 4 | 487 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1asq_A | 2e-39 | 28 | 488 | 4 | 487 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1asp_B | 2e-39 | 28 | 488 | 4 | 487 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1asp_A | 2e-39 | 28 | 488 | 4 | 487 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |
PDB | 1aso_B | 2e-39 | 28 | 488 | 4 | 487 | A Chain A, Crystal Structure Of The C-Terminal Globular Domain Of Oligosaccharyltransferase (Af_0329) From Archaeoglobus Fulgidus |