Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00012002m |
Family | GH35 |
Protein Properties | Length: 624 Molecular Weight: 68936.5 Isoelectric Point: 9.369 |
Chromosome | Chromosome/Scaffold: 087337 Start: 644 End: 3992 |
Description | beta galactosidase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH35 | 41 | 344 | 0 |
LVINGRRRILISGSIHYPRSTPEMWPGLIQKAKDGGLDVVQTYVFWNGHEPAQGQYHFADRYDLVRFLKLVKQAGLYAHLRIGPYVCAEWNFGGFPVWLK YVPGIKFRTDNGPFKAAMQKFVEKIVSMMKSEGLFEWQGGPIIMAQVENEFGPMESVVGSGAKPYANWAAKMAVGTNTGVPWVMCKQDDAPDPVINTCNG FYCDYFTPNKKYKPTMWTEAWTGWFTKFGGAVPHRPVEDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPIDEFGMLRQPKWGHLR DLHR |
Full Sequence |
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Protein Sequence Length: 624 Download |
MAAAPPPPVA GGGRVLLAAF LAASLLASAA NAAVSYDHRS LVINGRRRIL ISGSIHYPRS 60 TPEMWPGLIQ KAKDGGLDVV QTYVFWNGHE PAQGQYHFAD RYDLVRFLKL VKQAGLYAHL 120 RIGPYVCAEW NFGGFPVWLK YVPGIKFRTD NGPFKAAMQK FVEKIVSMMK SEGLFEWQGG 180 PIIMAQVENE FGPMESVVGS GAKPYANWAA KMAVGTNTGV PWVMCKQDDA PDPVINTCNG 240 FYCDYFTPNK KYKPTMWTEA WTGWFTKFGG AVPHRPVEDL AFAVARFIQK GGSFVNYYMY 300 HGGTNFGRTA GGPFIATSYD YDAPIDEFGM LRQPKWGHLR DLHRAIKQAE PALVSGDPTI 360 QSLGNYEKAY VFKSKNGACA AFLSNYHTNS AVKVRFNGRH YDLPAWSISI LPDCKTAVFN 420 TATVKEPTLL PKMNPVLRFA WQSYSEDTNS LADSAFTKDG LVEQLSLTWD KSDYLWYTTQ 480 VNIGANEQFL KSGQWPQLTV YSAGHSMQVF VNGRSYGSVY GGYENPKLTF TGHVKMWQGS 540 NKISILSSAV GLPNTGNHFE SWNVGVLGPV TLSGLNEGRR DLSHQKWTYQ VGLKGESLGL 600 HIVTGSSAVE WAGAGGKQPL TWHK |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02449 | Glyco_hydro_42 | 0.003 | 56 | 192 | 153 | + Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. | ||
COG1874 | LacA | 5.0e-24 | 34 | 336 | 352 | + Beta-galactosidase [Carbohydrate transport and metabolism] | ||
pfam01301 | Glyco_hydro_35 | 4.0e-159 | 40 | 346 | 322 | + Glycosyl hydrolases family 35. | ||
PLN03059 | PLN03059 | 0 | 34 | 624 | 596 | + beta-galactosidase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0004565 | beta-galactosidase activity |
GO:0005975 | carbohydrate metabolic process |
GO:0009341 | beta-galactosidase complex |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
Swiss-Prot | A2X2H7 | 0 | 31 | 624 | 35 | 626 | BGAL4_ORYSI RecName: Full=Beta-galactosidase 4; Short=Lactase 4; Flags: Precursor |
GenBank | ACG30563.1 | 0 | 31 | 624 | 25 | 618 | beta-galactosidase precursor [Zea mays] |
GenBank | EAZ22260.1 | 0 | 31 | 624 | 35 | 626 | hypothetical protein OsJ_05915 [Oryza sativa Japonica Group] |
Swiss-Prot | Q6Z6K4 | 0 | 31 | 624 | 35 | 626 | BGAL4_ORYSJ RecName: Full=Beta-galactosidase 4; Short=Lactase 4; Flags: Precursor |
RefSeq | XP_002453540.1 | 0 | 34 | 624 | 45 | 635 | hypothetical protein SORBIDRAFT_04g007660 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3d3a_A | 0 | 28 | 342 | 2 | 325 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_D | 1.99993e-41 | 34 | 414 | 11 | 403 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_C | 1.99993e-41 | 34 | 414 | 11 | 403 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_B | 1.99993e-41 | 34 | 414 | 11 | 403 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
PDB | 3thd_A | 1.99993e-41 | 34 | 414 | 11 | 403 | A Chain A, Crystal Structure Of A Beta-Galactosidase From Bacteroides Thetaiotaomicron |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
lactose degradation III | BETAGALACTOSID-RXN | EC-3.2.1.23 | β-galactosidase |