y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00012215m |
Family | CE10 |
Protein Properties | Length: 253 Molecular Weight: 26560.1 Isoelectric Point: 4.6593 |
Chromosome | Chromosome/Scaffold: 084318 Start: 3278 End: 4036 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 57 | 248 | 0 |
APAPVRWKDVVYEETHNLSLRVFVPPAGAEKLPVLVYFHGGGFVINSFASPEFHAACLRLAAELPAVVLSADYCLAPEHRLPAAHDDAETLFSWLRAQAA ATTDPWLAESADFGRVFVSGDSAGGNIAHHMTVRIGSGALATGAARVAGCILLYPFFGGEQRTASEAACPDDVYLTLTVSDQMWRLALPAGA |
Full Sequence |
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Protein Sequence Length: 253 Download |
MSSTTTPASA VPASELVPAH VVEDLQGIVQ LLSDGTVKRV QMPLVLPGDA SEPSPDAPAP 60 VRWKDVVYEE THNLSLRVFV PPAGAEKLPV LVYFHGGGFV INSFASPEFH AACLRLAAEL 120 PAVVLSADYC LAPEHRLPAA HDDAETLFSW LRAQAAATTD PWLAESADFG RVFVSGDSAG 180 GNIAHHMTVR IGSGALATGA ARVAGCILLY PFFGGEQRTA SEAACPDDVY LTLTVSDQMW 240 RLALPAGASR DC* 300 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
cd00312 | Esterase_lipase | 5.0e-5 | 74 | 227 | 168 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
COG2272 | PnbA | 2.0e-8 | 74 | 184 | 119 | + Carboxylesterase type B [Lipid metabolism] | ||
PRK10162 | PRK10162 | 9.0e-10 | 77 | 214 | 139 | + acetyl esterase; Provisional | ||
COG0657 | Aes | 5.0e-23 | 61 | 251 | 193 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 2.0e-45 | 91 | 251 | 161 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAO24912.1 | 0 | 20 | 251 | 9 | 243 | putative esterase [Oryza sativa Japonica Group] |
GenBank | EAY92127.1 | 0 | 20 | 251 | 9 | 243 | hypothetical protein OsI_13838 [Oryza sativa Indica Group] |
RefSeq | NP_001051515.1 | 0 | 20 | 251 | 27 | 261 | Os03g0790500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002461496.1 | 0 | 1 | 251 | 1 | 254 | hypothetical protein SORBIDRAFT_02g003570 [Sorghum bicolor] |
RefSeq | XP_002462164.1 | 0 | 20 | 251 | 16 | 253 | hypothetical protein SORBIDRAFT_02g020810 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 0 | 29 | 251 | 24 | 242 | A Chain A, Bacillus Subtilis Pectate Lyase R279k Mutant |
PDB | 2o7r_A | 0 | 29 | 251 | 24 | 242 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 2e-32 | 85 | 251 | 109 | 265 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 2e-32 | 85 | 251 | 109 | 265 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 2e-32 | 85 | 251 | 109 | 265 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FE658765 | 252 | 1 | 251 | 0 |
FL733214 | 251 | 1 | 250 | 0 |
FL834484 | 252 | 1 | 251 | 0 |
FE649923 | 252 | 1 | 251 | 0 |
FL764625 | 248 | 1 | 247 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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