Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00012374m |
Family | AA1 |
Protein Properties | Length: 448 Molecular Weight: 48758.7 Isoelectric Point: 8.1059 |
Chromosome | Chromosome/Scaffold: 088156 Start: 2199 End: 4014 |
Description | laccase 17 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 28 | 446 | 0 |
AIREYQFDVQMTNVTRLCSSKSIVTVNGQFPGPTVFAREGDLVVVRVVNHVPYNMSIHWHGIRQLRSGWADGPAYITQCPIQSGQSYVYKFTITGQRGTL WWHAHISWLRATVYGAIVILPKPGVPYPFPAPDKEVPIMFGEWWTADTEAVISQALQTGGGPNVSDAFTINGLPGPLYNCSAKDTFKLKVQPGKTYMLRI INAALNDELFFSIAGHPLTIVDVDAVYIKPITVETILITPGQTTNVLLTTKPSYPGATYYMLAAPYSTARSGTFDNTTVAGILEYEDPASPSPAAFNKNL PVLKPTLPQINDTSFVANYTGKLRSLATAEYPADVPREVDRRFFFTVGLGTHPCAVNGTCQGPTNDTRFAASVNNVSFVLPTTALLQAHFTGRSNGVYSP NFPAAPLVPFNYTGTPPNN |
Full Sequence |
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Protein Sequence Length: 448 Download |
MATSYLLRCS SLVAVLVLLF SIGMTEGAIR EYQFDVQMTN VTRLCSSKSI VTVNGQFPGP 60 TVFAREGDLV VVRVVNHVPY NMSIHWHGIR QLRSGWADGP AYITQCPIQS GQSYVYKFTI 120 TGQRGTLWWH AHISWLRATV YGAIVILPKP GVPYPFPAPD KEVPIMFGEW WTADTEAVIS 180 QALQTGGGPN VSDAFTINGL PGPLYNCSAK DTFKLKVQPG KTYMLRIINA ALNDELFFSI 240 AGHPLTIVDV DAVYIKPITV ETILITPGQT TNVLLTTKPS YPGATYYMLA APYSTARSGT 300 FDNTTVAGIL EYEDPASPSP AAFNKNLPVL KPTLPQINDT SFVANYTGKL RSLATAEYPA 360 DVPREVDRRF FFTVGLGTHP CAVNGTCQGP TNDTRFAASV NNVSFVLPTT ALLQAHFTGR 420 SNGVYSPNFP AAPLVPFNYT GTPPNNTN |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
pfam00394 | Cu-oxidase | 6.0e-43 | 161 | 313 | 157 | + Multicopper oxidase. Many of the proteins in this family contain multiple similar copies of this plastocyanin-like domain. |
PLN02604 | PLN02604 | 2.0e-43 | 22 | 448 | 456 | + oxidoreductase |
pfam07732 | Cu-oxidase_3 | 2.0e-49 | 35 | 151 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. |
TIGR03388 | ascorbase | 6.0e-50 | 29 | 415 | 408 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. |
TIGR03389 | laccase | 0 | 27 | 447 | 422 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34362.1 | 0 | 1 | 448 | 1 | 452 | unknown [Zea mays] |
GenBank | EEC71780.1 | 0 | 1 | 448 | 1 | 447 | hypothetical protein OsI_04394 [Oryza sativa Indica Group] |
RefSeq | NP_001044773.1 | 0 | 1 | 448 | 1 | 447 | Os01g0842500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147942.1 | 0 | 1 | 448 | 1 | 452 | L-ascorbate oxidase [Zea mays] |
RefSeq | XP_002458747.1 | 0 | 1 | 448 | 1 | 449 | hypothetical protein SORBIDRAFT_03g039530 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3v9e_A | 5e-37 | 27 | 322 | 65 | 359 | A Chain A, Structure Of The L513m Mutant Of The Laccase From B.aclada |
PDB | 3sqr_A | 5e-37 | 27 | 322 | 65 | 359 | A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution |
PDB | 1asq_B | 1e-36 | 29 | 415 | 3 | 379 | A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution |
PDB | 1asq_A | 1e-36 | 29 | 415 | 3 | 379 | A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution |
PDB | 1asp_B | 1e-36 | 29 | 415 | 3 | 379 | A Chain A, Crystal Structure Of Laccase From Botrytis Aclada At 1.67 A Resolution |