Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00013211m |
Family | GT75 |
Protein Properties | Length: 254 Molecular Weight: 28377.7 Isoelectric Point: 8.0383 |
Chromosome | Chromosome/Scaffold: 018415 Start: 977 End: 2258 |
Description | reversibly glycosylated polypeptide 3 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT75 | 1 | 239 | 0 |
VAKDPSGKDINALEQHIKNLLSPSTPFFFNTLYDPYRDGADFVRGYPFSLREGVPTAVSHGLWLNIPDYDAPTQLVKPLERNKRYVDAILTIPKGTLFPM CGMNLAFDRELIGPAMYFGLMGDGQPIGRYDDMWAGWCTKVITDHLGLGVKTGLPYIWHSKASNPFVNLKKEYNGIFWQEELIPFFQSVSLPKDATTVQK CYLELAKQVRAKLGKVDAYFNKLADSMVTWIEAWDELNP |
Full Sequence |
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Protein Sequence Length: 254 Download |
VAKDPSGKDI NALEQHIKNL LSPSTPFFFN TLYDPYRDGA DFVRGYPFSL REGVPTAVSH 60 GLWLNIPDYD APTQLVKPLE RNKRYVDAIL TIPKGTLFPM CGMNLAFDRE LIGPAMYFGL 120 MGDGQPIGRY DDMWAGWCTK VITDHLGLGV KTGLPYIWHS KASNPFVNLK KEYNGIFWQE 180 ELIPFFQSVS LPKDATTVQK CYLELAKQVR AKLGKVDAYF NKLADSMVTW IEAWDELNPP 240 KGGVATANGP PKK* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03214 | RGP | 3.0e-148 | 1 | 241 | 244 | + Reversibly glycosylated polypeptide. | ||
PLN03180 | PLN03180 | 0 | 1 | 241 | 241 | + reversibly glycosylated polypeptide; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0005618 | cell wall |
GO:0007047 | : GO:0044234 |
GO:0008466 | glycogenin glucosyltransferase activity |
GO:0016758 | transferase activity, transferring hexosyl groups |
GO:0030054 | cell junction |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27755.1 | 0 | 1 | 253 | 109 | 361 | unknown [Zea mays] |
GenBank | EEC82411.1 | 0 | 1 | 252 | 113 | 364 | hypothetical protein OsI_26792 [Oryza sativa Indica Group] |
RefSeq | NP_001060224.1 | 0 | 1 | 252 | 113 | 364 | Os07g0604800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148994.1 | 0 | 1 | 253 | 109 | 361 | LOC100282614 [Zea mays] |
RefSeq | XP_002460988.1 | 0 | 1 | 253 | 109 | 361 | hypothetical protein SORBIDRAFT_02g038770 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
HO825738 | 252 | 1 | 252 | 0 |
DT549582 | 253 | 1 | 252 | 0 |
DT543714 | 239 | 1 | 239 | 0 |
EY706165 | 246 | 1 | 246 | 0 |
EX447588 | 246 | 1 | 246 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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