y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00014003m |
Family | CE8 |
Protein Properties | Length: 630 Molecular Weight: 67772.6 Isoelectric Point: 8.2787 |
Chromosome | Chromosome/Scaffold: 019282 Start: 74 End: 2303 |
Description | Plant invertase/pectin methylesterase inhibitor superfamily |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE8 | 315 | 611 | 0 |
NVVVAKDGSGKFKTINEALNAMPKSNDGRYVIQVKEGVYEEYVTITKTMVNVTLLGEGSKKSIVTGKKNFVDGLTTFKTATFTAQGDGFMAIGMGFQNTA GPEKHQAVALLVQSDKSIFLNCRMDAFQDTLYAHSKAQFYRNCVISGTVDFIFGDAAAVFQNCILVLRRPMDNQQNIATAQGRADAREATGFVLQKCEFQ AETALRDAARPPIRNYLGRPWRECSRTLIMESEIPDFIDKAGYMPWNGDFGLKTLWYAEYGNTGPGASTAGRVNWAGYKKVISKADATKFTVENFLH |
Full Sequence |
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Protein Sequence Length: 630 Download |
MSSSAFGDFG PLTERRKAEK ARQQRRRIMI AVGTVTIIIL LIVMGSLAVT YSGKSSSEGK 60 KSSKGSSPSK GKSGGGGSSS SSSDSDSDSE SESESESSKS KPADLKAVSK SIKAMCSQTD 120 YTDACEQSIG KAANASATSP TDIVRTAVEV IGDAIKQAFD RADLILSNDP RVKAAVADCK 180 EIFGDAKDDL NRTVKGVDAK DGLSKEGYQL RIWLSAVIAH METCIDGFPD DDFKVKVKDS 240 FTSGKELTSN ALALIEKGSS LLSALKGSKR RLLGEEEEGA GAAAALDKDG IPGWVPDDDR 300 RVLKGGGFKN TLTPNVVVAK DGSGKFKTIN EALNAMPKSN DGRYVIQVKE GVYEEYVTIT 360 KTMVNVTLLG EGSKKSIVTG KKNFVDGLTT FKTATFTAQG DGFMAIGMGF QNTAGPEKHQ 420 AVALLVQSDK SIFLNCRMDA FQDTLYAHSK AQFYRNCVIS GTVDFIFGDA AAVFQNCILV 480 LRRPMDNQQN IATAQGRADA REATGFVLQK CEFQAETALR DAARPPIRNY LGRPWRECSR 540 TLIMESEIPD FIDKAGYMPW NGDFGLKTLW YAEYGNTGPG ASTAGRVNWA GYKKVISKAD 600 ATKFTVENFL HAQPWIDPTG TPVKYDLFT* 660 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02990 | PLN02990 | 2.0e-145 | 102 | 622 | 538 | + Probable pectinesterase/pectinesterase inhibitor | ||
PLN02468 | PLN02468 | 2.0e-149 | 106 | 627 | 529 | + putative pectinesterase/pectinesterase inhibitor | ||
PLN02314 | PLN02314 | 3.0e-152 | 109 | 622 | 529 | + pectinesterase | ||
pfam01095 | Pectinesterase | 5.0e-178 | 315 | 610 | 296 | + Pectinesterase. | ||
PLN02745 | PLN02745 | 0 | 108 | 628 | 524 | + Putative pectinesterase/pectinesterase inhibitor |
Gene Ontology | |
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GO Term | Description |
GO:0004857 | enzyme inhibitor activity |
GO:0005618 | cell wall |
GO:0030599 | pectinesterase activity |
GO:0042545 | cell wall modification |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN34013.1 | 0 | 1 | 629 | 1 | 630 | unknown [Zea mays] |
GenBank | EAZ44838.1 | 0 | 103 | 629 | 161 | 690 | hypothetical protein OsJ_29475 [Oryza sativa Japonica Group] |
RefSeq | NP_001063246.1 | 0 | 3 | 629 | 2 | 617 | Os09g0433700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001132793.1 | 0 | 1 | 629 | 1 | 623 | hypothetical protein LOC100194282 [Zea mays] |
RefSeq | XP_002462429.1 | 0 | 1 | 629 | 1 | 628 | hypothetical protein SORBIDRAFT_02g025460 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1gq8_A | 0 | 310 | 627 | 3 | 319 | A Chain A, Pectin Methylesterase From Carrot |
PDB | 1xg2_A | 0 | 312 | 620 | 1 | 308 | B Chain B, Crystal Structure Of The Complex Between Pectin Methylesterase And Its Inhibitor Protein |
PDB | 1qjv_B | 7e-20 | 313 | 539 | 3 | 249 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 1qjv_A | 7e-20 | 313 | 539 | 3 | 249 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
PDB | 2ntq_B | 8e-20 | 313 | 584 | 3 | 314 | A Chain A, Pectin Methylesterase Pema From Erwinia Chrysanthemi |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan degradation | RXN-2102 | EC-3.1.1.11 | pectinesterase |