Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00014028m |
Family | GT43 |
Protein Properties | Length: 225 Molecular Weight: 23503.9 Isoelectric Point: 10.7314 |
Chromosome | Chromosome/Scaffold: 0190622 Start: 150 End: 824 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 125 | 224 | 1.10001e-40 |
MAHTLRLAPPPLLWVVVEAAPDVPATARLLRATGLMYRHLTYKDNFTAADAAAGRERHHQRNVALGHIEHHRLAGVVLFAGLGDVFDLRFFDQLRQIRYV |
Full Sequence |
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Protein Sequence Length: 225 Download |
MGSSADHGGA GGRGKKQGSQ LWKKALLHSC LCFVMGFFTG FAPSSVSDWT SAAVSAGGVG 60 SSHVVRALQT AAGGAVNRSL LAHGGSVGGA GLLDAATPRP LLVVVTTTES APAASGERAA 120 ALTRMAHTLR LAPPPLLWVV VEAAPDVPAT ARLLRATGLM YRHLTYKDNF TAADAAAGRE 180 RHHQRNVALG HIEHHRLAGV VLFAGLGDVF DLRFFDQLRQ IRYVP |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 1.0e-22 | 125 | 224 | 110 | + Glycosyltransferase family 43. | ||
cd00218 | GlcAT-I | 3.0e-27 | 122 | 224 | 109 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). | ||
PLN02458 | PLN02458 | 3.0e-51 | 21 | 221 | 221 | + transferase, transferring glycosyl groups |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABF95369.1 | 0 | 1 | 222 | 1 | 218 | Glycosyltransferase family 43 protein, expressed [Oryza sativa (japonica cultivar-group)] |
DDBJ | BAF11694.2 | 0 | 1 | 222 | 1 | 218 | Os03g0287800 [Oryza sativa Japonica Group] |
RefSeq | NP_001049780.1 | 0 | 1 | 222 | 1 | 218 | Os03g0287800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147664.1 | 0 | 1 | 221 | 1 | 220 | beta3-glucuronyltransferase [Zea mays] |
RefSeq | XP_002468048.1 | 0 | 1 | 221 | 1 | 227 | hypothetical protein SORBIDRAFT_01g038640 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1v84_B | 0.0000000000008 | 100 | 224 | 3 | 133 | A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine |
PDB | 1v84_A | 0.0000000000008 | 100 | 224 | 3 | 133 | A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine |
PDB | 1v83_B | 0.0000000000008 | 100 | 224 | 3 | 133 | A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine |
PDB | 1v83_A | 0.0000000000008 | 100 | 224 | 3 | 133 | A Chain A, Golgi Alpha-mannosidase Ii In Complex With Kifunensine |
PDB | 1v82_B | 0.0000000000008 | 100 | 224 | 3 | 133 | A Chain A, Crystal Structure Of Human Glcat-P Apo Form |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
EG377374 | 201 | 21 | 221 | 0 |
HX129161 | 201 | 21 | 221 | 0 |
EE157383 | 201 | 21 | 221 | 0 |
HX163937 | 201 | 21 | 221 | 0 |
DC999368 | 187 | 21 | 207 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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