Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00014109m |
Family | GH17 |
Protein Properties | Length: 403 Molecular Weight: 41760 Isoelectric Point: 4.9449 |
Chromosome | Chromosome/Scaffold: 018554 Start: 5651 End: 9015 |
Description | beta-1,3-glucanase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH17 | 85 | 396 | 0 |
IGVNYGMVANNLPAPEQVISMYKARNISYVRLFHPDASVLNALRGSGIGVVLGTLNEDLQRLASDPSYAASWVAANVQPFAGAVQFRYINAGNEVIPGEA AAHVLPAMQNLESALRSAGVSGVPVTTAVATAVLGASYPPSQGVFSEAAGPVMAPIVSYLSSKNAPLLVNVYPYFAYSGSGGEVALGYALLSADSGAAAS VADGGVVYTNMFDAIVDAAHAAVEKAGVQGLELVVSETGWPSGGGEGASVENAAAYNNNVVRHVGGGTPRRPGKAVETYLFAMFNENGKAEGVEQHFGLF QPDMSEVYHVDF |
Full Sequence |
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Protein Sequence Length: 403 Download |
MEERELLQTP ASVQTSEFRP RTESFRRELE RERKREGFLS STPAYGGAAR MVSAAARVMK 60 AAAPWVLACG FLLCLAGSPG AEGAIGVNYG MVANNLPAPE QVISMYKARN ISYVRLFHPD 120 ASVLNALRGS GIGVVLGTLN EDLQRLASDP SYAASWVAAN VQPFAGAVQF RYINAGNEVI 180 PGEAAAHVLP AMQNLESALR SAGVSGVPVT TAVATAVLGA SYPPSQGVFS EAAGPVMAPI 240 VSYLSSKNAP LLVNVYPYFA YSGSGGEVAL GYALLSADSG AAASVADGGV VYTNMFDAIV 300 DAAHAAVEKA GVQGLELVVS ETGWPSGGGE GASVENAAAY NNNVVRHVGG GTPRRPGKAV 360 ETYLFAMFNE NGKAEGVEQH FGLFQPDMSE VYHVDFSAGS AS* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00332 | Glyco_hydro_17 | 7.0e-113 | 85 | 396 | 314 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACG35188.1 | 0 | 62 | 400 | 2 | 342 | glucan endo-1,3-beta-glucosidase GVI precursor [Zea mays] |
GenBank | ACG35292.1 | 0 | 44 | 400 | 3 | 355 | glucan endo-1,3-beta-glucosidase GVI precursor [Zea mays] |
GenBank | EAY98549.1 | 0 | 80 | 400 | 34 | 356 | hypothetical protein OsI_20461 [Oryza sativa Indica Group] |
RefSeq | NP_001055934.1 | 0 | 63 | 400 | 11 | 350 | Os05g0495900 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002440008.1 | 0 | 44 | 401 | 3 | 363 | hypothetical protein SORBIDRAFT_09g024320 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 0 | 85 | 396 | 1 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0 | 85 | 397 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 0 | 85 | 397 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_B | 0 | 85 | 397 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_A | 0 | 85 | 397 | 2 | 316 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL760521 | 221 | 15 | 235 | 0 |
FE656899 | 228 | 139 | 366 | 0 |
CT850108 | 246 | 64 | 309 | 0 |
CN140208 | 172 | 64 | 235 | 0 |
FL760521 | 30 | 236 | 265 | 0.000001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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