y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00014366m |
Family | GH1 |
Protein Properties | Length: 498 Molecular Weight: 57141.6 Isoelectric Point: 6.902 |
Chromosome | Chromosome/Scaffold: 041059 Start: 678 End: 3823 |
Description | B-S glucosidase 44 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH1 | 33 | 496 | 0 |
RESFPAGFVFGTASSAYQVEGNTLKYGRGPCIWDTFLKYPGTTPDNATANVTVDEYNRYMDDVDNMVRVGFDAYRFSISWSRIFPSGIGRINKDGVDYYH RLINYLLANHITPYVVLYHYDLPQVLQDQYNGWLSPRIVDDFTRFADFCFRTYGDRVKNWFTINEPRMMASHGYGDGYFPPARCTGCHFGGNSATEPYIA GHNLLLAHASAVKLYREKYQVPQGGKIGILLDFVWYEPLTSSIDDEYAAHRARMFTLGWFLHPITYGHYPESMEKIVMGRLPNFTFEQSAMVKGSADYIA INHYTTYYASNYVNETHTSYANDWHVKLSYERNGVPIGKKGYSDWLYVVPWGLYKALIWTKEKFNNPIMLIGENGIDQSGSDTLPYALYDNFRIDYFEKY LHELQCAIHDGAKVIGYFAWSLLDNFEWRMGFTSKFGIVYVDRSTFTRYPKDSARWFRKVIKNE |
Full Sequence |
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Protein Sequence Length: 498 Download |
MATLAPLLLH GLLSLSLALG AHSMPGDHGN LTRESFPAGF VFGTASSAYQ VEGNTLKYGR 60 GPCIWDTFLK YPGTTPDNAT ANVTVDEYNR YMDDVDNMVR VGFDAYRFSI SWSRIFPSGI 120 GRINKDGVDY YHRLINYLLA NHITPYVVLY HYDLPQVLQD QYNGWLSPRI VDDFTRFADF 180 CFRTYGDRVK NWFTINEPRM MASHGYGDGY FPPARCTGCH FGGNSATEPY IAGHNLLLAH 240 ASAVKLYREK YQVPQGGKIG ILLDFVWYEP LTSSIDDEYA AHRARMFTLG WFLHPITYGH 300 YPESMEKIVM GRLPNFTFEQ SAMVKGSADY IAINHYTTYY ASNYVNETHT SYANDWHVKL 360 SYERNGVPIG KKGYSDWLYV VPWGLYKALI WTKEKFNNPI MLIGENGIDQ SGSDTLPYAL 420 YDNFRIDYFE KYLHELQCAI HDGAKVIGYF AWSLLDNFEW RMGFTSKFGI VYVDRSTFTR 480 YPKDSARWFR KVIKNEE* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02849 | PLN02849 | 3.0e-122 | 32 | 496 | 471 | + beta-glucosidase | ||
PLN02814 | PLN02814 | 9.0e-126 | 31 | 489 | 467 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-129 | 36 | 495 | 467 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 2.0e-131 | 37 | 489 | 454 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 3.0e-172 | 32 | 495 | 469 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABC55716.1 | 0 | 27 | 497 | 19 | 491 | beta-mannosidase 3 [Oncidium Gower Ramsey] |
GenBank | ABC55717.1 | 0 | 7 | 497 | 6 | 501 | beta-mannosidase 2 [Oncidium Gower Ramsey] |
GenBank | EEC69164.1 | 0 | 7 | 496 | 6 | 491 | hypothetical protein OsI_38122 [Oryza sativa Indica Group] |
RefSeq | NP_001066656.1 | 0 | 7 | 496 | 6 | 491 | Os12g0420100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002438912.1 | 0 | 15 | 497 | 24 | 480 | hypothetical protein SORBIDRAFT_10g028060 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2rgm_B | 0 | 29 | 494 | 13 | 480 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 2rgm_A | 0 | 29 | 494 | 13 | 480 | A Chain A, Characterization And Engineering Of The Bifunctional N- And O-glucosyltransferase Involved In Xenobiotic Metabolism In Plants |
PDB | 2rgl_B | 0 | 29 | 494 | 13 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 2rgl_A | 0 | 29 | 494 | 13 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3f5l_B | 0 | 29 | 494 | 13 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |