y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00014652m |
Family | GH1 |
Protein Properties | Length: 428 Molecular Weight: 49074.2 Isoelectric Point: 8.7774 |
Chromosome | Chromosome/Scaffold: 041659 Start: 30 End: 2803 |
Description | B-S glucosidase 44 |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GH1 | 2 | 427 | 0 |
GNVVGNQNGDVAVDQYHRYKEDVDLMKSLNFDAYRFSISWSRIFPDGEGRVNPEGVAYYNNLINYLLQKGMTPYVNIYHYDLPLALEKKYGGWLSSKMAD LFTEYADFCFKTYGDRVKHWFTFNEPRIVAALGYDAGSNPPQRCTKCANGGNSATEPYIVAHNFLLAHAAAVARYRTKYQAAQKGKVGIVLDFNWYEPLT NSPDDQAAAQRARDFHVGWFVDPLINGHYPQIMQDLVKERLPRFTPEQAKLVKGSADYIGINQYTASYMKGQKLLQQTPTSYSDDWQVQYVHERNGKPIG PQANSDWLYIVPTGMYGCVNYLREKYGNPTVYITENGMDQPGNLTRDQYLRDVTRVRFYKSYIGQLKRAIDQGANVAGYFAWSLLDNFEWRSGYSSKFGI VYVDFNTLERHPKASAYWFRDMLKKN |
Full Sequence |
---|
Protein Sequence Length: 428 Download |
PGNVVGNQNG DVAVDQYHRY KEDVDLMKSL NFDAYRFSIS WSRIFPDGEG RVNPEGVAYY 60 NNLINYLLQK GMTPYVNIYH YDLPLALEKK YGGWLSSKMA DLFTEYADFC FKTYGDRVKH 120 WFTFNEPRIV AALGYDAGSN PPQRCTKCAN GGNSATEPYI VAHNFLLAHA AAVARYRTKY 180 QAAQKGKVGI VLDFNWYEPL TNSPDDQAAA QRARDFHVGW FVDPLINGHY PQIMQDLVKE 240 RLPRFTPEQA KLVKGSADYI GINQYTASYM KGQKLLQQTP TSYSDDWQVQ YVHERNGKPI 300 GPQANSDWLY IVPTGMYGCV NYLREKYGNP TVYITENGMD QPGNLTRDQY LRDVTRVRFY 360 KSYIGQLKRA IDQGANVAGY FAWSLLDNFE WRSGYSSKFG IVYVDFNTLE RHPKASAYWF 420 RDMLKKN* 480 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02814 | PLN02814 | 8.0e-115 | 9 | 425 | 425 | + beta-glucosidase | ||
PLN02998 | PLN02998 | 5.0e-116 | 6 | 425 | 428 | + beta-glucosidase | ||
COG2723 | BglB | 1.0e-124 | 1 | 427 | 432 | + Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism] | ||
TIGR03356 | BGL | 3.0e-137 | 1 | 420 | 420 | + beta-galactosidase. | ||
pfam00232 | Glyco_hydro_1 | 9.0e-158 | 1 | 427 | 431 | + Glycosyl hydrolase family 1. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2RGL | 0 | 1 | 425 | 56 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA- Glucosidase |
PDB | 3F4V | 0 | 1 | 425 | 56 | 480 | A Chain A, Semi-Active E176q Mutant Of Rice Bglu1, A Plant ExoglucanaseBETA-Glucosidase |
GenBank | AAA84906.3 | 0 | 1 | 425 | 79 | 503 | beta-glucosidase [Oryza sativa Japonica Group] |
RefSeq | NP_001051013.1 | 0 | 1 | 425 | 79 | 503 | Os03g0703000 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001142124.1 | 0 | 1 | 427 | 76 | 502 | hypothetical protein LOC100274288 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2rgm_B | 0 | 1 | 425 | 56 | 480 | A Chain A, Crystal Structure Of A Glutaryl-Coa Dehydrogenase From Mycobacterium Smegmatis In Complex With Fadh2 |
PDB | 2rgm_A | 0 | 1 | 425 | 56 | 480 | A Chain A, Crystal Structure Of A Glutaryl-Coa Dehydrogenase From Mycobacterium Smegmatis In Complex With Fadh2 |
PDB | 2rgl_B | 0 | 1 | 425 | 56 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 2rgl_A | 0 | 1 | 425 | 56 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
PDB | 3f5l_B | 0 | 1 | 425 | 56 | 480 | A Chain A, Rice Bglu1 Beta-Glucosidase, A Plant ExoglucanaseBETA-Glucosidase |
Metabolic Pathways | |||
---|---|---|---|
Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
GO876641 | 355 | 72 | 425 | 0 |
GO868734 | 336 | 1 | 336 | 0 |
JG956213 | 282 | 126 | 407 | 0 |
GR880165 | 298 | 123 | 420 | 0 |
HO777739 | 425 | 2 | 423 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|