Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00014837m |
Family | AA6 |
Protein Properties | Length: 356 Molecular Weight: 39161.4 Isoelectric Point: 8.8745 |
Chromosome | Chromosome/Scaffold: 041692 Start: 1694 End: 5685 |
Description | flavodoxin-like quinone reductase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA6 | 160 | 350 | 0 |
VYYSTYGHVGKLAEEIKKGASSVEGVEAKIWQVPETLPEEVLGKMGAPPKPDVPVITPQELAEADGILFGFPTRFGMMAAQMKAFFDATGGLWREQSLAG KPAGIFFSTGTQGGGQETTPLTAITQLTHHGMVFVPVGYTFGAKLFGMDQVQGGSPYGAGTFAADGSRWPSEVELEHAFHQGKYFAGIAKK |
Full Sequence |
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Protein Sequence Length: 356 Download |
MSPEEHRSRG GSNVGGQELH GARVNLSYKI EKKEGEKRWQ EKEEVQEQSC FRHYFREICT 60 PHLVSNCRTR RDPFFKNDEI HLKEPGKRPA HWTQTPVKNL CVDKKRQFPR SPSGLRSSGP 120 SPMAVKVYVV YRTQGLNHDG SSLKNKGNET VCITEWLNDV YYSTYGHVGK LAEEIKKGAS 180 SVEGVEAKIW QVPETLPEEV LGKMGAPPKP DVPVITPQEL AEADGILFGF PTRFGMMAAQ 240 MKAFFDATGG LWREQSLAGK PAGIFFSTGT QGGGQETTPL TAITQLTHHG MVFVPVGYTF 300 GAKLFGMDQV QGGSPYGAGT FAADGSRWPS EVELEHAFHQ GKYFAGIAKK LKGSA* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam00258 | Flavodoxin_1 | 2.0e-9 | 160 | 290 | 144 | + Flavodoxin. | ||
pfam03358 | FMN_red | 4.0e-14 | 170 | 298 | 130 | + NADPH-dependent FMN reductase. | ||
COG0655 | WrbA | 4.0e-41 | 157 | 353 | 204 | + Multimeric flavodoxin WrbA [General function prediction only] | ||
TIGR01755 | flav_wrbA | 2.0e-65 | 160 | 351 | 193 | + NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR are not detected [Energy metabolism, Electron transport]. | ||
PRK03767 | PRK03767 | 3.0e-80 | 160 | 353 | 195 | + NAD(P)H:quinone oxidoreductase; Provisional |
Gene Ontology | |
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GO Term | Description |
GO:0009055 | electron carrier activity |
GO:0010181 | FMN binding |
GO:0016491 | oxidoreductase activity |
GO:0050662 | coenzyme binding |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86423.1 | 0 | 160 | 355 | 8 | 203 | unknown [Zea mays] |
GenBank | EAY76084.1 | 0 | 160 | 355 | 8 | 203 | hypothetical protein OsI_04011 [Oryza sativa Indica Group] |
RefSeq | NP_001044464.1 | 0 | 160 | 355 | 8 | 203 | Os01g0784800 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149575.1 | 0 | 160 | 355 | 8 | 203 | LOC100283201 [Zea mays] |
RefSeq | NP_001151729.1 | 0 | 160 | 355 | 8 | 203 | LOC100285365 [Zea mays] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 4dy4_C | 0 | 160 | 353 | 6 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 4dy4_A | 0 | 160 | 353 | 6 | 197 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_B | 0 | 160 | 353 | 7 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6m_A | 0 | 160 | 353 | 7 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
PDB | 3b6k_B | 0 | 160 | 353 | 7 | 198 | A Chain A, High Resolution Structure Of E.coli Wrba With Fmn |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DN146424 | 216 | 141 | 356 | 0 |
FE636222 | 216 | 141 | 356 | 0 |
DN146425 | 216 | 141 | 356 | 0 |
FL771035 | 216 | 141 | 356 | 0 |
FL783855 | 197 | 160 | 356 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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