CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00014838m
FamilyCBM57
Protein PropertiesLength: 843 Molecular Weight: 93834.2 Isoelectric Point: 6.695
ChromosomeChromosome/Scaffold: 040233 Start: 1431 End: 4281
Descriptionhercules receptor kinase 2
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
CBM572203585.6e-21
  YRLNIGGPALKSASDQYLHRPWYTDEAFMFSANAAQTVSNTSSIMYVSGNDSSIAPIDVYETARIMGNNMVVDKRFNVSWRFYVHPNFDYLVRLHFCELV
  YDKPSQRIFRIYINNKTAVENYDVYARAGAINKAYHEDF
Full Sequence
Protein Sequence     Length: 843     Download
MSPVVLAVVS IAFFSLQFLR AHGSELLLSC GSNGTVDADG RRWIGDMASG GNFTLSSPGL    60
AAPLAGKSSS DEILRPIYSS ARVFETTTWY TISVLPGSYC VRLHFFSSTY GNFSANNSVF    120
DITAHDFKLA SKFNVSEEIV WRNSVSNSVI NAVVKEYFLV VGSRGLQIEF DPSPGSFAFV    180
NALEVMLTPD NLFNDTVTKV GVAGVQLPLG LSDRGVETMY RLNIGGPALK SASDQYLHRP    240
WYTDEAFMFS ANAAQTVSNT SSIMYVSGND SSIAPIDVYE TARIMGNNMV VDKRFNVSWR    300
FYVHPNFDYL VRLHFCELVY DKPSQRIFRI YINNKTAVEN YDVYARAGAI NKAYHEDFFD    360
YLTQQADSLW LQLGADSMTS ASGTDALLNG LEIYKLSRNG TLAYVLGHID MGNQRDSSKG    420
GKRKELWEEV GIGSASVVAV TSVALFSWCY IRKKRKAVKK EAPPGWHPLV LHEAMKSTTD    480
ARATSKSSLT RNTSSIGHRM GRRFSIAEIR AATKNFDESL VIGTGGFGKV YKGEIDEGTT    540
VAIKRANTLC GQGLKEFETE IEMLSKLRHR HLVAMIGYCE EQKEMILVYE YMAKGTLRSH    600
LYGSDLPPLT WKQRIDVCIG AARGLHYLHT GADRGVIHRD VKTTNILLDE NFVAKIADFG    660
LSKTGPTLDQ THVSTAVRGS FGYLDPEYFR RQQLTQKSDV YSFGVVLFEV ACARPVIDPT    720
LPKDQINLAE WAMRWQRQRS LEAIMDPRLD GDFSSESLKK FGEIAEKCLA DDGRSRPSMG    780
EILWHLEYVL QLHEAYKRNV DSESFGSGEL GFDDISFSLP HIREGEEEHH SKPSSIREEP    840
DT* 
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
pfam12819Malectin_like8.0e-5128396381+
smart00219TyrKc4.0e-51521786278+
cd00180PKc3.0e-51522718201+
smart00221STYKc8.0e-52521786279+
cd00192PTKc6.0e-52521787285+
Gene Ontology
GO TermDescription
GO:0004672protein kinase activity
GO:0005524ATP binding
GO:0006468protein phosphorylation
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
EMBLCAB51834.1018421844l1332.5 [Oryza sativa Indica Group]
EMBLCAH66974.1018421844H0714H04.1 [Oryza sativa (indica cultivar-group)]
EMBLCBI31024.102183021820unnamed protein product [Vitis vinifera]
RefSeqNP_001053900.1018421844Os04g0619600 [Oryza sativa (japonica cultivar-group)]
RefSeqXP_002448548.1018426847hypothetical protein SORBIDRAFT_06g028840 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB2qkw_B050379528319A Chain A, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto
PDB3hgk_D050379528319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_C050379528319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_B050379528319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
PDB3hgk_A050379528319E Chain E, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto
Signal Peptide
Cleavage Site
23
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
JG9619282705388070
DN2177072585267830
JK5841302325647950
HO7987985032657460
DN5599252265597840
Orthologous Group
SpeciesID
Aquilegia coeruleaAquca_026_00352.1
Brassica rapaBra032404
Citrus clementinaCiclev10014250m
Citrus sinensisorange1.1g047215m
Eucalyptus grandisEucgr.K01945.1
Fragaria vescamrna28878.1-v1.0-hybrid
Malus domesticaMDP0000843097
Manihot esculentacassava4.1_030005m
Populus trichocarpaPotri.011G164700.1Potri.001G467000.1
Setaria italicaSi028931m
Vitis viniferaGSVIVT01021662001
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny