CAZyme Information

Basic Information
SpeciesPanicum virgatum
Cazyme IDPavirv00014997m
FamilyGH16
Protein PropertiesLength: 294 Molecular Weight: 32521.2 Isoelectric Point: 4.743
ChromosomeChromosome/Scaffold: 040570 Start: 1207 End: 2278
Descriptionxyloglucan endotransglucosylase/hydrolase 25
View CDS
External Links
CAZyDB
Signature Domain  Download full data set without filtering
FamilyStartEndEvalue
GH16602161.3e-25
  SLVLDENSGAGFNSTEKYLFGEFSVEMKLVPGNSAGTVTSFYLTSGEGDDHDEIDMEFMGNSSGAPTVLNTNVWASGDGKKEHQFYLWFDPSADFHKYTI
  IWNAKNIIFRVDDVTVRAFRRYADLPYPDARPMAVHATLWDGSYWATEKGKVPIDWA
Full Sequence
Protein Sequence     Length: 294     Download
MARRSLAPLA PPPSLALAAA VVALAFCFHP ASAQSAWLDE FRTDGEVRSD FDASGKQVAS    60
LVLDENSGAG FNSTEKYLFG EFSVEMKLVP GNSAGTVTSF YLTSGEGDDH DEIDMEFMGN    120
SSGAPTVLNT NVWASGDGKK EHQFYLWFDP SADFHKYTII WNAKNIIFRV DDVTVRAFRR    180
YADLPYPDAR PMAVHATLWD GSYWATEKGK VPIDWAAAPF VVSYRGYIAN ACVAHGGGGR    240
TSCPAGRNEW MDRELDDTDR LTVAWARRNC LQYNYCEDGW RFREGFPGEC SRE*          300
Functional Domains Download unfiltered results here
Cdd IDDomainE-ValueStartEndLengthDomain Description
cd02183GH16_fungal_CRH1_transglycosylase2.0e-1873220161+
cd02175GH16_lichenase9.0e-2067202139+
pfam00722Glyco_hydro_168.0e-6455216163+
PLN03161PLN031611.0e-7061292239+
cd02176GH16_XET2.0e-11454290242+
Gene Ontology
GO TermDescription
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005618cell wall
GO:0005975carbohydrate metabolic process
GO:0006073cellular glucan metabolic process
GO:0016762xyloglucan:xyloglucosyl transferase activity
Annotations - NR Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
GenBankACF85167.1092932287unknown [Zea mays]
GenBankACG39534.1092922289xyloglucan endotransglycosylase/hydrolase protein 8 precursor [Zea mays]
GenBankACS13757.103629224282xyloglucan xyloglucosyl transferase [Hordeum vulgare]
RefSeqNP_001130144.1092932287hypothetical protein LOC100191238 [Zea mays]
RefSeqXP_002445324.10122929290hypothetical protein SORBIDRAFT_07g009410 [Sorghum bicolor]
Annotations - PDB Download unfiltered results here
SourceHit IDE-ValueQuery StartQuery EndHit StartHit EndDescription
PDB1un1_B05429334275A Chain A, Cholesterol Esterase From Bos Taurus
PDB1un1_A05429334275A Chain A, Cholesterol Esterase From Bos Taurus
PDB1umz_B05429334275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB1umz_A05429334275A Chain A, Xyloglucan Endotransglycosylase In Complex With The Xyloglucan Nonasaccharide Xllg.
PDB2vh9_B06028164282A Chain A, Crystal Structure Of Nxg1-Deltayniig In Complex With Xllg, A Xyloglucan Derived Oligosaccharide
Signal Peptide
Cleavage Site
33
Hydropathy
EST Download unfiltered results here
HitLengthStartEndEValue
CD437945260372940
FL942004212262370
DR799053264262860
DR798740254262760
EB708605253262750
Orthologous Group
SpeciesID
Brachypodium distachyonBradi1g09690.1Bradi1g09700.1Bradi3g18590.1Bradi3g18600.1Bradi5g20718.1
Oryza sativaLOC_Os08g13920.1
Panicum virgatumPavirv00060809mPavirv00011489mPavirv00022766mPavirv00032512mPavirv00011651m
Pavirv00065073mPavirv00039266mPavirv00018963mPavirv00059833m
Setaria italicaSi014242mSi014194mSi014232mSi014215mSi014233m
Sorghum bicolorSb06g015930.1Sb06g015880.1Sb06g015940.1Sb07g009410.1
Sequence Alignments  (This image is cropped. Click for full image.)
Phylogeny