Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015084m |
Family | GT48 |
Protein Properties | Length: 836 Molecular Weight: 96772.1 Isoelectric Point: 6.4476 |
Chromosome | Chromosome/Scaffold: 040465 Start: 1120 End: 6209 |
Description | glucan synthase-like 12 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT48 | 96 | 831 | 0 |
VPSNLEARRRLTFFTNSLFMDMPDAPKVRNMLSFSALTPYYNEPVLFSIKELEEENEDGVSTLFYLQKIYPDEWKNFQERVGWEEELKESEELMEELRLW ASYRGQTLARTVRGMMYYRKALILEAFLDMAKREDLMEGYKAAESVTDEQWKIHQRSLFAQCEAVADMKFTYVVSCQQYGNDKRAALSNAQDILQLMRNY SSLRVAYIDEVEDRVGDKKMETAYYSTLVKVALTKDSESVDPVQNLDQVIYRIKLPGPAMLGEGKPENQNHAIIFTRGEGLQTIDMNQDNYMEEALKMRN LLQEFLKEHGVRRPSILGVREHIFTGSVSSLAWFMSNQEHSFVTIGQRLLANPLKVRFHYGHPDVFDRLFHLTRGGVSKASKSINLSEDIFAGYNSTLRG GNVTHHEYVQVGKGRDVGLNQISKFEAKVANGNGEQTLSRDIYRLGHRFDFFRMLSCYFTTVGFYFSTLLTVVTVYVFLYGRLYLALSGLEVGLSHGRFI HNHPLQVALASQSLVQLGFLMALPMMMEIGLERGFGKALSEFIMMNLQLAATHYYGRMLLHGGAQYRGTGRGFVVFHAKFAENYRLYSRSHFVKGIELMI LLIIYQLFGQSYRSTIAYIFITFCMWFLVLTWLFAPFLFNPSGFEWAKIVDDWSDWNKWISNRGGIGVSPDKSWESWWEVEQEHLKYSGTIGIFLEIILA VRFFIYQYGLIYHLHITGNNKSILVYLISWLVIVVV |
Full Sequence |
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Protein Sequence Length: 836 Download |
EKNDEKDRSA VIKIFQDMLE IVTRDIFEDQ LSIVESNHGG SYRRNEDTTT WDQEYQLFQP 60 SGAIEFPLKV TDTDAWLEKI KRLELLLTVK ESAMDVPSNL EARRRLTFFT NSLFMDMPDA 120 PKVRNMLSFS ALTPYYNEPV LFSIKELEEE NEDGVSTLFY LQKIYPDEWK NFQERVGWEE 180 ELKESEELME ELRLWASYRG QTLARTVRGM MYYRKALILE AFLDMAKRED LMEGYKAAES 240 VTDEQWKIHQ RSLFAQCEAV ADMKFTYVVS CQQYGNDKRA ALSNAQDILQ LMRNYSSLRV 300 AYIDEVEDRV GDKKMETAYY STLVKVALTK DSESVDPVQN LDQVIYRIKL PGPAMLGEGK 360 PENQNHAIIF TRGEGLQTID MNQDNYMEEA LKMRNLLQEF LKEHGVRRPS ILGVREHIFT 420 GSVSSLAWFM SNQEHSFVTI GQRLLANPLK VRFHYGHPDV FDRLFHLTRG GVSKASKSIN 480 LSEDIFAGYN STLRGGNVTH HEYVQVGKGR DVGLNQISKF EAKVANGNGE QTLSRDIYRL 540 GHRFDFFRML SCYFTTVGFY FSTLLTVVTV YVFLYGRLYL ALSGLEVGLS HGRFIHNHPL 600 QVALASQSLV QLGFLMALPM MMEIGLERGF GKALSEFIMM NLQLAATHYY GRMLLHGGAQ 660 YRGTGRGFVV FHAKFAENYR LYSRSHFVKG IELMILLIIY QLFGQSYRST IAYIFITFCM 720 WFLVLTWLFA PFLFNPSGFE WAKIVDDWSD WNKWISNRGG IGVSPDKSWE SWWEVEQEHL 780 KYSGTIGIFL EIILAVRFFI YQYGLIYHLH ITGNNKSILV YLISWLVIVV VLLVMK 840 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam02364 | Glucan_synthase | 0 | 96 | 811 | 795 | + 1,3-beta-glucan synthase component. This family consists of various 1,3-beta-glucan synthase components including Gls1, Gls2 and Gls3 from yeast. 1,3-beta-glucan synthase EC:2.4.1.34 also known as callose synthase catalyzes the formation of a beta-1,3-glucan polymer that is a major component of the fungal cell wall. The reaction catalyzed is:- UDP-glucose + {(1,3)-beta-D-glucosyl}(N) <=> UDP + {(1,3)-beta-D-glucosyl}(N+1). |
Gene Ontology | |
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GO Term | Description |
GO:0000148 | 1,3-beta-D-glucan synthase complex |
GO:0003843 | 1,3-beta-D-glucan synthase activity |
GO:0006075 | (1->3)-beta-D-glucan biosynthetic process |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAM19120.1 | 0 | 1 | 814 | 630 | 1475 | AC104427_18 Putative glucan synthase [Oryza sativa Japonica Group] |
GenBank | EEC74436.1 | 0 | 1 | 814 | 969 | 1790 | hypothetical protein OsI_09824 [Oryza sativa Indica Group] |
GenBank | EEE58116.1 | 0 | 1 | 836 | 935 | 1774 | hypothetical protein OsJ_09005 [Oryza sativa Japonica Group] |
GenBank | EEE58260.1 | 0 | 1 | 814 | 985 | 1806 | hypothetical protein OsJ_09261 [Oryza sativa Japonica Group] |
RefSeq | XP_002465944.1 | 0 | 1 | 836 | 554 | 1401 | hypothetical protein SORBIDRAFT_01g048630 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
callose biosynthesis | 13-BETA-GLUCAN-SYNTHASE-RXN | EC-2.4.1.34 | 1,3-β-glucan synthase |