Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015193m |
Family | GH100 |
Protein Properties | Length: 561 Molecular Weight: 63211.6 Isoelectric Point: 6.627 |
Chromosome | Chromosome/Scaffold: 041173 Start: 898 End: 4537 |
Description | cytosolic invertase 2 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH100 | 90 | 545 | 0 |
PHPIVGDAWEALRRSLVFFRGQPLGTVAAVDHASEEVLNYDQVFVRDFVPSALAFLMNGEPDIVRNFLLKTLLLQGWEKKVDRFKLGEGAMPASFKVMHD AKKGVETLHADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDLTLAETPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFF MALRCALQMLKHDNEGKEFVEKIATRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDSIPDWLFDFMPCQGGFFIGNVSPARMDFRWF ALGNMIAILSSLATPEQSAAIMDLIEERWEELIGEMPLKICYPAIENHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRAIDLAER RLLKDGWPEYYDGTLGRYVGKQARKFQTWSIAGYLVAKMMLEDPSHLGMISLEEDR |
Full Sequence |
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Protein Sequence Length: 561 Download |
MELAVGGGMR RSASHTSLSE SDDFELTRLL SKPRINVERQ RSFDDRSLSD VSHSGGYGRG 60 GAFDGMYSPG GGLRSLVGTP ASSALHSFEP HPIVGDAWEA LRRSLVFFRG QPLGTVAAVD 120 HASEEVLNYD QVFVRDFVPS ALAFLMNGEP DIVRNFLLKT LLLQGWEKKV DRFKLGEGAM 180 PASFKVMHDA KKGVETLHAD FGESAIGRVA PVDSGFWWII LLRAYTKSTG DLTLAETPEC 240 QKGMRLILSL CLSEGFDTFP TLLCADGCCM IDRRMGVYGY PIEIQALFFM ALRCALQMLK 300 HDNEGKEFVE KIATRLHALS YHMRSYFWLD FQQLNDIYRY KTEEYSHTAV NKFNVIPDSI 360 PDWLFDFMPC QGGFFIGNVS PARMDFRWFA LGNMIAILSS LATPEQSAAI MDLIEERWEE 420 LIGEMPLKIC YPAIENHEWR IVTGCDPKNT RWSYHNGGSW PVLLWLLTAA CIKTGRPQIA 480 RRAIDLAERR LLKDGWPEYY DGTLGRYVGK QARKFQTWSI AGYLVAKMML EDPSHLGMIS 540 LEEDRAMLKP VLKRSASWTN * |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG3408 | GDB1 | 1.0e-6 | 210 | 528 | 338 | + Glycogen debranching enzyme [Carbohydrate transport and metabolism] | ||
PLN03005 | PLN03005 | 0 | 6 | 559 | 555 | + beta-fructofuranosidase | ||
PLN02973 | PLN02973 | 0 | 7 | 559 | 561 | + beta-fructofuranosidase | ||
pfam12899 | Glyco_hydro_100 | 0 | 96 | 533 | 438 | + Alkaline and neutral invertase. This is a family of bacterial and plant alkaline and neutral invertases, EC:3.2.1.26, previously known as Invertase_neut pfam04853. | ||
PLN02703 | PLN02703 | 0 | 64 | 548 | 490 | + beta-fructofuranosidase |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN28251.1 | 0 | 1 | 560 | 1 | 559 | unknown [Zea mays] |
GenBank | EAY86242.1 | 0 | 66 | 560 | 1 | 494 | hypothetical protein OsI_07611 [Oryza sativa Indica Group] |
RefSeq | NP_001047095.1 | 0 | 1 | 560 | 1 | 562 | Os02g0550600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001130493.1 | 0 | 1 | 560 | 1 | 559 | hypothetical protein LOC100191591 [Zea mays] |
RefSeq | XP_002453965.1 | 0 | 1 | 560 | 1 | 559 | hypothetical protein SORBIDRAFT_04g022350 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
ES848839 | 353 | 195 | 545 | 0 |
CK269009 | 330 | 230 | 559 | 0 |
ES809234 | 324 | 220 | 543 | 0 |
GO879297 | 308 | 238 | 545 | 0 |
GR876688 | 291 | 241 | 531 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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