y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015344m |
Family | CE10 |
Protein Properties | Length: 330 Molecular Weight: 34227.7 Isoelectric Point: 4.956 |
Chromosome | Chromosome/Scaffold: 064123 Start: 3085 End: 4074 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 42 | 325 | 2.52234e-44 |
VASRDVTIDAATGLQARLYLPDLSARPGGGEGGGRLPVVLYFHGGGLVAGSAADAPEHAFVNRLAARAGALAVSVDYRLAPEHPVPACYDDAWAALLWAT GTGAGAADPWVRDRGDAARVFLLGFSAGGNVAHSLALRAGSEPGRLPRGARVEGAALLHLFFLSKAAETPESEAKDAWVRGKLVELWAFACGGRTAGPDD PRVNPLADGAPSLARLGCGRVLVCLAEDALAAEGRAYHDALLASGWAAADAELLESRPADHEFHLREPESATAALLMDRLVALI |
Full Sequence |
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Protein Sequence Length: 330 Download |
MDPDAEVTFE FVPVIRQYKS GRVERLLPVT PVPPSVDAAT GVASRDVTID AATGLQARLY 60 LPDLSARPGG GEGGGRLPVV LYFHGGGLVA GSAADAPEHA FVNRLAARAG ALAVSVDYRL 120 APEHPVPACY DDAWAALLWA TGTGAGAADP WVRDRGDAAR VFLLGFSAGG NVAHSLALRA 180 GSEPGRLPRG ARVEGAALLH LFFLSKAAET PESEAKDAWV RGKLVELWAF ACGGRTAGPD 240 DPRVNPLADG APSLARLGCG RVLVCLAEDA LAAEGRAYHD ALLASGWAAA DAELLESRPA 300 DHEFHLREPE SATAALLMDR LVALIAGDQ* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK10162 | PRK10162 | 0.0001 | 37 | 127 | 93 | + acetyl esterase; Provisional | ||
cd00312 | Esterase_lipase | 2.0e-6 | 67 | 209 | 157 | + Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate. | ||
pfam00135 | COesterase | 2.0e-6 | 67 | 184 | 131 | + Carboxylesterase family. | ||
COG0657 | Aes | 1.0e-17 | 4 | 280 | 284 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 2.0e-30 | 80 | 280 | 209 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACF86971.2 | 0 | 1 | 328 | 1 | 328 | unknown [Zea mays] |
GenBank | EAZ07336.1 | 0 | 2 | 329 | 3 | 320 | hypothetical protein OsI_29585 [Oryza sativa Indica Group] |
RefSeq | NP_001062035.1 | 0 | 2 | 329 | 3 | 320 | Os08g0475300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147183.1 | 0 | 1 | 328 | 1 | 328 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002444519.1 | 0 | 1 | 327 | 1 | 333 | hypothetical protein SORBIDRAFT_07g023140 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ed1_F | 2e-26 | 32 | 286 | 52 | 312 | A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole- Succinocarboxamide Synthase With Adp From Methanocaldococcus Jannaschii |
PDB | 3ed1_E | 2e-26 | 32 | 286 | 52 | 312 | A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole- Succinocarboxamide Synthase With Adp From Methanocaldococcus Jannaschii |
PDB | 3ed1_D | 2e-26 | 32 | 286 | 52 | 312 | A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole- Succinocarboxamide Synthase With Adp From Methanocaldococcus Jannaschii |
PDB | 3ed1_C | 2e-26 | 32 | 286 | 52 | 312 | A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole- Succinocarboxamide Synthase With Adp From Methanocaldococcus Jannaschii |
PDB | 3ed1_B | 2e-26 | 32 | 286 | 52 | 312 | A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole- Succinocarboxamide Synthase With Adp From Methanocaldococcus Jannaschii |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR969195 | 210 | 1 | 208 | 0 |
DR735440 | 326 | 1 | 326 | 0 |
DV513282 | 312 | 6 | 316 | 0 |
DT652237 | 276 | 6 | 280 | 0 |
EB641958 | 275 | 6 | 279 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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