y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015345m |
Family | CE10 |
Protein Properties | Length: 325 Molecular Weight: 34859.6 Isoelectric Point: 5.742 |
Chromosome | Chromosome/Scaffold: 064123 Start: 1505 End: 2479 |
Description | alpha/beta-Hydrolases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CE10 | 45 | 323 | 0 |
TDAATGVASRDVVISPNVSARLYLPRLEGGAAKLPVLVYYHGGGFCLGSAFNPTFHAYFNSFAALAGVLVVSVEYRLAPEHPVPTAYADSWEALAWVVSH LAGPAKDPWVAGHADFARLYLGGESAGSNIAHHMAMRVAAEGLPHGAQIRGLVMIHPYFLGTDKVPSDDLDPVARESLGSLWRVMCPATTGEDDLLINPF VDGAPPLASLACGRVLVCVGERDVLRDRGRAYYDRLRASGWQGEAAIWQAPNKGHTFHLLEPSCDEAVAQDKVISDFLN |
Full Sequence |
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Protein Sequence Length: 325 Download |
MAASPVAPPP AAADDEIVYE SMPCIRIYKN RVERYFGSEF VAASTDAATG VASRDVVISP 60 NVSARLYLPR LEGGAAKLPV LVYYHGGGFC LGSAFNPTFH AYFNSFAALA GVLVVSVEYR 120 LAPEHPVPTA YADSWEALAW VVSHLAGPAK DPWVAGHADF ARLYLGGESA GSNIAHHMAM 180 RVAAEGLPHG AQIRGLVMIH PYFLGTDKVP SDDLDPVARE SLGSLWRVMC PATTGEDDLL 240 INPFVDGAPP LASLACGRVL VCVGERDVLR DRGRAYYDRL RASGWQGEAA IWQAPNKGHT 300 FHLLEPSCDE AVAQDKVISD FLNR* 360 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK10162 | PRK10162 | 1.0e-8 | 62 | 284 | 235 | + acetyl esterase; Provisional | ||
COG2272 | PnbA | 6.0e-9 | 72 | 260 | 224 | + Carboxylesterase type B [Lipid metabolism] | ||
pfam00135 | COesterase | 6.0e-12 | 66 | 191 | 143 | + Carboxylesterase family. | ||
COG0657 | Aes | 5.0e-30 | 59 | 324 | 272 | + Esterase/lipase [Lipid metabolism] | ||
pfam07859 | Abhydrolase_3 | 1.0e-51 | 81 | 303 | 227 | + alpha/beta hydrolase fold. This catalytic domain is found in a very wide range of enzymes. |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016787 | hydrolase activity |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEC83733.1 | 0 | 14 | 324 | 14 | 327 | hypothetical protein OsI_29586 [Oryza sativa Indica Group] |
RefSeq | NP_001062036.1 | 0 | 14 | 324 | 14 | 327 | Os08g0475400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001149234.1 | 0 | 14 | 323 | 14 | 326 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | NP_001150584.1 | 0 | 12 | 324 | 12 | 327 | gibberellin receptor GID1L2 [Zea mays] |
RefSeq | XP_002442315.1 | 0 | 14 | 324 | 14 | 335 | hypothetical protein SORBIDRAFT_08g017820 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2o7v_A | 1e-36 | 41 | 284 | 41 | 293 | A Chain A, Crystal Structure Of Phosphoribosylaminoimidazole- Succinocarboxamide Synthase With Adp From Methanocaldococcus Jannaschii |
PDB | 2o7r_A | 1e-36 | 41 | 284 | 41 | 293 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_F | 2e-31 | 41 | 323 | 52 | 348 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_E | 2e-31 | 41 | 323 | 52 | 348 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
PDB | 3ed1_D | 2e-31 | 41 | 323 | 52 | 348 | A Chain A, Plant Carboxylesterase Aecxe1 From Actinidia Eriantha With Acyl Adduct |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
formononetin biosynthesis | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
formononetin biosynthesis | RXN-3625 | - | 2,7-dihydroxy-4'-methoxyisoflavanone dehydratase |
isoflavonoid biosynthesis I | RXN-3284 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-3303 | EC-4.2.1.105 | 2-hydroxyisoflavanone dehydratase |
isoflavonoid biosynthesis II | RXN-5502 | - | 2,7,5-trihydroxy-4'-methoxyisoflavanone dehydratase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL951782 | 242 | 14 | 255 | 0 |
FL829875 | 242 | 14 | 255 | 0 |
FL930662 | 242 | 14 | 255 | 0 |
FE654520 | 242 | 14 | 255 | 0 |
FE654519 | 239 | 14 | 252 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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