Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015393m |
Family | GT8 |
Protein Properties | Length: 539 Molecular Weight: 60628.4 Isoelectric Point: 9.1145 |
Chromosome | Chromosome/Scaffold: 064379 Start: 1653 End: 4925 |
Description | galacturonosyltransferase 4 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 314 | 539 | 8.5e-41 |
CLPLRLANEYFSLDPDRQQFPNQHKLTNPKLYHYALFSDNILATAVVVNSTVLNAKHPSDHVFHIVTDRLNYAPMRMWFLSNPPGKATIEVQNIGEFTWL NDSYSPVLKQLGSQSMIDYYFGTNRANPDSNLKYRNPKYLSILNHLRFYLPEIYPKLDKMVFLDDDIVVKKDLTGLWSINMKGKVNGAVETCGESFHRFD RYLNFSNHVIAKNFDPHACGWAFGMN |
Full Sequence |
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Protein Sequence Length: 539 Download |
MVRTRRSVLL LLLALALTML SPLAFYTSRL PTAFNPIQMR DFPGEITNQM SGGRGVKANK 60 LNALPLETVS SLKEPVGIVF SDELGGLSKE STESEGQELP SRKAGEHKSC VLSEVTAAAD 120 GIEVLEQVPR REAQDGGLVS TDSEEQEKTT GSQQQSSSEE ILLETMPKQT SDKFVAENSL 180 TARTDGKTKS FVLPDTRIRN IKDQLIKAKV YLGLGSIRAN SQYLKDLRQR IREVQKVLGD 240 ASKDTDLPKN ANEKVKALEQ MLIKGRQMQD DCSIVVKKLR AMLHSAEEQL HAHKKQTVFL 300 TQLAAKTLPK GLHCLPLRLA NEYFSLDPDR QQFPNQHKLT NPKLYHYALF SDNILATAVV 360 VNSTVLNAKH PSDHVFHIVT DRLNYAPMRM WFLSNPPGKA TIEVQNIGEF TWLNDSYSPV 420 LKQLGSQSMI DYYFGTNRAN PDSNLKYRNP KYLSILNHLR FYLPEIYPKL DKMVFLDDDI 480 VVKKDLTGLW SINMKGKVNG AVETCGESFH RFDRYLNFSN HVIAKNFDPH ACGWAFGMN 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02523 | PLN02523 | 2.0e-114 | 247 | 539 | 299 | + galacturonosyltransferase | ||
PLN02742 | PLN02742 | 7.0e-135 | 188 | 539 | 358 | + Probable galacturonosyltransferase | ||
PLN02718 | PLN02718 | 1.0e-143 | 22 | 539 | 530 | + Probable galacturonosyltransferase | ||
PLN02910 | PLN02910 | 5.0e-153 | 195 | 539 | 349 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 0 | 22 | 539 | 523 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN31213.1 | 0 | 1 | 539 | 1 | 536 | unknown [Zea mays] |
GenBank | EEC83380.1 | 0 | 21 | 539 | 20 | 530 | hypothetical protein OsI_28795 [Oryza sativa Indica Group] |
RefSeq | NP_001061555.1 | 0 | 21 | 539 | 20 | 530 | Os08g0327100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001148932.1 | 0 | 1 | 539 | 1 | 535 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002444200.1 | 0 | 29 | 539 | 28 | 535 | hypothetical protein SORBIDRAFT_07g014890 [Sorghum bicolor] |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |