Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015460m |
Family | GH3 |
Protein Properties | Length: 642 Molecular Weight: 68667.6 Isoelectric Point: 9.9045 |
Chromosome | Chromosome/Scaffold: 062903 Start: 726 End: 4430 |
Description | Glycosyl hydrolase family protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GH3 | 128 | 352 | 0 |
LSTRLGIPAMFGIDAVHGHGYVYKATVFPHNVGLGCTRDPELAKKIGAAVALEVRATGIPFIFAPCLAVCRDPRWGRCYESFSEEPKLASKEKSRRAAVE NPFIAGQRNVAACAKHYVGDGGTTRGINENNTVATFHQLLGIHMPPYYSAVIQGVSTIMVSYSSWNGVKMHANRFLVTDFLKNKLRFRGFVVSDWLGLDR ITSPEHADYPLSVKLGILAGIDMVM |
Full Sequence |
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Protein Sequence Length: 642 Download |
MGIPPAGGGT GSSCGRVVAA AASLVLLIQL ISGCVSPAAA GGGGEQQGAK YKDPKQPLHA 60 RVDDLLRRMT LAEKIGQMSQ IDQENATADV ISNYFIGSVL RGGGSVPAAD APPEAWVEMV 120 DAIQRTALST RLGIPAMFGI DAVHGHGYVY KATVFPHNVG LGCTRDPELA KKIGAAVALE 180 VRATGIPFIF APCLAVCRDP RWGRCYESFS EEPKLASKEK SRRAAVENPF IAGQRNVAAC 240 AKHYVGDGGT TRGINENNTV ATFHQLLGIH MPPYYSAVIQ GVSTIMVSYS SWNGVKMHAN 300 RFLVTDFLKN KLRFRGFVVS DWLGLDRITS PEHADYPLSV KLGILAGIDM VMIPYQYKEF 360 RDDLTTLVQN GSIPMSRIDD AVRRILRVKF TLGLFENPYA DTNLAVELGN QEHRDLAREA 420 VRKSLVLLKN GKPGDTPLLP LPKKAHGGIL VAGSHADDLG SQCGGWTIKW QGLTGNNLTA 480 GTTILDGIKR AVGAPSGPRA PTSSTPRAPT PASSSGAKVV TIPTPSRRDG RRQPEPYHPG 540 AGAGRHPECV RRHQVRRGAR LRAAAGGGAV HRRHNALVAA WLPGTEGQGV ADVLLGDYGF 600 TGKLSRTWFR SVEQLPMNVG DAHYDPLFPF GFGLETRPLK T* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PRK15098 | PRK15098 | 4.0e-9 | 581 | 634 | 76 | + beta-D-glucoside glucohydrolase; Provisional | ||
PLN03080 | PLN03080 | 5.0e-30 | 57 | 467 | 445 | + Probable beta-xylosidase; Provisional | ||
PRK15098 | PRK15098 | 6.0e-64 | 54 | 493 | 460 | + beta-D-glucoside glucohydrolase; Provisional | ||
COG1472 | BglX | 1.0e-82 | 69 | 468 | 410 | + Beta-glucosidase-related glycosidases [Carbohydrate transport and metabolism] | ||
pfam00933 | Glyco_hydro_3 | 1.0e-87 | 70 | 388 | 324 | + Glycosyl hydrolase family 3 N terminal domain. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAF07705.2 | 0 | 50 | 637 | 16 | 617 | Os02g0131400 [Oryza sativa Japonica Group] |
RefSeq | NP_001045791.1 | 0 | 50 | 637 | 44 | 645 | Os02g0131400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001051275.1 | 0 | 44 | 637 | 20 | 621 | Os03g0749300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002451476.1 | 0 | 40 | 638 | 42 | 659 | hypothetical protein SORBIDRAFT_04g002570 [Sorghum bicolor] |
RefSeq | XP_002453253.1 | 0 | 33 | 638 | 27 | 655 | hypothetical protein SORBIDRAFT_04g002560 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1j8v_A | 0 | 51 | 640 | 5 | 603 | A Chain A, Structural Basis For The Regulation Of N-Acetylglutamate Kinase By Pii In Arabidopsis Thaliana |
PDB | 1iex_A | 0 | 51 | 640 | 5 | 603 | A Chain A, Structural Basis For The Regulation Of N-Acetylglutamate Kinase By Pii In Arabidopsis Thaliana |
PDB | 1iew_A | 0 | 51 | 640 | 5 | 603 | A Chain A, Structural Basis For The Regulation Of N-Acetylglutamate Kinase By Pii In Arabidopsis Thaliana |
PDB | 1iev_A | 0 | 51 | 640 | 5 | 603 | A Chain A, Structural Basis For The Regulation Of N-Acetylglutamate Kinase By Pii In Arabidopsis Thaliana |
PDB | 1ieq_A | 0 | 51 | 640 | 5 | 603 | A Chain A, Structural Basis For The Regulation Of N-Acetylglutamate Kinase By Pii In Arabidopsis Thaliana |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
coumarin biosynthesis (via 2-coumarate) | RXN-8036 | EC-3.2.1.21 | β-glucosidase |
linamarin degradation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-13602 | EC-3.2.1.21 | β-glucosidase |
linustatin bioactivation | RXN-5341 | EC-3.2.1.21 | β-glucosidase |
lotaustralin degradation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-13603 | EC-3.2.1.21 | β-glucosidase |
neolinustatin bioactivation | RXN-9674 | EC-3.2.1.21 | β-glucosidase |
taxiphyllin bioactivation | RXN-13600 | EC-3.2.1.21 | β-glucosidase |