Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015507m |
Family | GT8 |
Protein Properties | Length: 486 Molecular Weight: 55808.5 Isoelectric Point: 6.8734 |
Chromosome | Chromosome/Scaffold: 064373 Start: 1344 End: 3306 |
Description | galacturonosyltransferase 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 145 | 459 | 0 |
CLTVKLTEEWLRNPKHRSRSEEQRNSTRLVDNNLYHFCIFSDNVLATSVVVNSTVSNANHPQQLVFHVVTDRIHFGAMSTWFLINDFKGCTVEVRCIDEF SWLNASSSPLVRQLSEVETQGYYYSAGSKHPEREIKFHNPKFVSLLNHLRFYIPQILPNLEKVVFLDDDVVVQKDLTQLFSIELHGNVIGAVETCLESFH RYHKYLNFSHPTISSKIDPHTCGWAFGMNIFDLIAWRKANATSLYHYWQEQNSDLLLWRTGTLPAGLLTFYGLMEPLDRRWHVLGLGYDVDIDDRLIESS AVVHYNGNMKPWLKL |
Full Sequence |
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Protein Sequence Length: 486 Download |
DNGSEIEEVP HEKVNFTEEL LSSTSFARQL ADQMTLAKAY VILAKEHGNL QLAWELSSQI 60 RNCQRLLSEG AVSGRAITPD EAHPIISRLA RLIYKAQDAH YDISTTIVTL KSHALALEER 120 AKAAIVQSAE FGQLAAESFP KSLHCLTVKL TEEWLRNPKH RSRSEEQRNS TRLVDNNLYH 180 FCIFSDNVLA TSVVVNSTVS NANHPQQLVF HVVTDRIHFG AMSTWFLIND FKGCTVEVRC 240 IDEFSWLNAS SSPLVRQLSE VETQGYYYSA GSKHPEREIK FHNPKFVSLL NHLRFYIPQI 300 LPNLEKVVFL DDDVVVQKDL TQLFSIELHG NVIGAVETCL ESFHRYHKYL NFSHPTISSK 360 IDPHTCGWAF GMNIFDLIAW RKANATSLYH YWQEQNSDLL LWRTGTLPAG LLTFYGLMEP 420 LDRRWHVLGL GYDVDIDDRL IESSAVVHYN GNMKPWLKLA IRRYKYIWER YVNFSHPYVR 480 ECMLH* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02718 | PLN02718 | 1.0e-119 | 28 | 485 | 464 | + Probable galacturonosyltransferase | ||
PLN02523 | PLN02523 | 6.0e-145 | 28 | 482 | 478 | + galacturonosyltransferase | ||
PLN02910 | PLN02910 | 3.0e-151 | 22 | 482 | 473 | + polygalacturonate 4-alpha-galacturonosyltransferase | ||
PLN02829 | PLN02829 | 9.0e-160 | 28 | 482 | 457 | + Probable galacturonosyltransferase | ||
PLN02742 | PLN02742 | 0 | 1 | 485 | 485 | + Probable galacturonosyltransferase |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EEE59250.1 | 0 | 1 | 485 | 94 | 577 | hypothetical protein OsJ_11255 [Oryza sativa Japonica Group] |
RefSeq | NP_001050360.1 | 0 | 1 | 485 | 58 | 541 | Os03g0413400 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001147871.1 | 0 | 1 | 485 | 59 | 543 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | NP_001151784.1 | 0 | 1 | 485 | 59 | 543 | LOC100285419 [Zea mays] |
RefSeq | XP_002465134.1 | 0 | 1 | 485 | 59 | 543 | hypothetical protein SORBIDRAFT_01g032570 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ss9_A | 0.00001 | 283 | 456 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1ga8_A | 0.00004 | 283 | 456 | 75 | 252 | A Chain A, Crystal Structural Analysis Of Active Site Mutant Q189e Of Lgtc |
PDB | 1g9r_A | 0.00004 | 283 | 456 | 75 | 252 | A Chain A, Crystal Structure Of Galactosyltransferase Lgtc In Complex With Mn And Udp-2f-Galactose |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
homogalacturonan biosynthesis | 2.4.1.43-RXN | EC-2.4.1.43 | polygalacturonate 4-α-galacturonosyltransferase |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
CK370854 | 287 | 1 | 287 | 0 |
JG861833 | 296 | 81 | 376 | 0 |
JG923879 | 268 | 103 | 370 | 0 |
GT034874 | 254 | 204 | 457 | 0 |
GT034874 | 29 | 458 | 486 | 0.00003 |
Sequence Alignments (This image is cropped. Click for full image.) |
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