Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015553m |
Family | GT43 |
Protein Properties | Length: 332 Molecular Weight: 37545.2 Isoelectric Point: 9.5133 |
Chromosome | Chromosome/Scaffold: 064560 Start: 1371 End: 2850 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT43 | 93 | 308 | 0 |
LAHTLRLVPAPLLWLVVERGAATHETAALLRGCGVMYRHLASPGDDDDARRRAVERRRGGLRQRNAALDHIERHRIHGLVYFADEDNVYSLDLFQQLRAI RSFGTWPVAMLGVGKSKTLLEGPVCDDSRVVGWHTNGRHSRSRRFHVNTSGFAFNSTMLWDADKRAHQAWNYIRLLDTVREGFQETTFIEQLVEDETHME GVPADCSKIMNFNLRL |
Full Sequence |
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Protein Sequence Length: 332 Download |
MAAAAAALPF SPRRPFSSPC FLLCFLLGFV AGLFPFAHRH LLLDLRNLPL PDHDPRPALA 60 RVPAAAAERE PPTLIVVTPT RARPLQAYRL HRLAHTLRLV PAPLLWLVVE RGAATHETAA 120 LLRGCGVMYR HLASPGDDDD ARRRAVERRR GGLRQRNAAL DHIERHRIHG LVYFADEDNV 180 YSLDLFQQLR AIRSFGTWPV AMLGVGKSKT LLEGPVCDDS RVVGWHTNGR HSRSRRFHVN 240 TSGFAFNSTM LWDADKRAHQ AWNYIRLLDT VREGFQETTF IEQLVEDETH MEGVPADCSK 300 IMNFNLRLED KHLVYPKGWQ MTQNLDVIIP L* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03360 | Glyco_transf_43 | 7.0e-56 | 93 | 309 | 221 | + Glycosyltransferase family 43. | ||
PLN02458 | PLN02458 | 7.0e-57 | 74 | 308 | 240 | + transferase, transferring glycosyl groups | ||
cd00218 | GlcAT-I | 2.0e-74 | 73 | 309 | 241 | + Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43). |
Gene Ontology | |
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GO Term | Description |
GO:0015018 | galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity |
GO:0016020 | membrane |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
EMBL | CAN73652.1 | 0 | 74 | 331 | 55 | 305 | hypothetical protein [Vitis vinifera] |
EMBL | CBI19320.1 | 0 | 74 | 331 | 130 | 380 | unnamed protein product [Vitis vinifera] |
RefSeq | NP_001064310.1 | 0 | 16 | 331 | 12 | 343 | Os10g0205300 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001105783.1 | 0 | 6 | 331 | 2 | 330 | glycosyltransferase [Zea mays] |
RefSeq | XP_002455452.1 | 0 | 5 | 331 | 2 | 340 | hypothetical protein SORBIDRAFT_03g011010 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2d0j_D | 2e-29 | 72 | 313 | 3 | 231 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_C | 2e-29 | 72 | 313 | 3 | 231 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_B | 2e-29 | 72 | 313 | 3 | 231 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 2d0j_A | 2e-29 | 72 | 313 | 3 | 231 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |
PDB | 1v84_B | 7e-28 | 72 | 314 | 3 | 239 | A Chain A, Crystal Structure Of Human Glcat-S Apo Form |