Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015675m |
Family | AA1 |
Protein Properties | Length: 572 Molecular Weight: 62254.4 Isoelectric Point: 8.6589 |
Chromosome | Chromosome/Scaffold: 063071 Start: 1411 End: 4100 |
Description | laccase 17 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 27 | 564 | 0 |
TRYYTFNVTMQNVTRLCTTRAIPTVNGKFPGPKIVTREGDRVVVKVVNNVKDNVTIHWHGVRQLRTGWSDGPAYVTQCPIRTGQSYVYNFTITGQRGTLL WHAHVSWMRATLYGPIVILPKRGVPYPFPVKPYKEVPIIFGEWFKTDPEAIIAQALKTGAGPNVSDAFTINGLPGPLYNCSSKDTFKLKVQPGKWYLLRL INAALNEDLFFSIANHTLTVVDVDAAYVKPFHADVVLITPGQTTNVLLRAEPDAGCPAATHLMLARPYSTGQPGTFDNTTVAAVLEYAPPGHIKSLPLLR PPLPTLNDTAFAANYSAKLRSLATPEYPANVPRGVDRSFFFTVGLGTNPCPANRTCQGPNGSMFTASMNNVSFGMPTTALLQAHYSNIAGVYATDFPAAP LEAFNYTGTPPNNTHVSNGTKVVELQYNTSVEVVLQGTSILGAESHPLHLHGFDFFVVGQGFGNYDSSKDPAKFNLVDPVQRNTVGVPAAGWVAIRFFAD NPGVWFMHCHLEVHTSWGLKMAWVVNDGPLPEQKLMPP |
Full Sequence |
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Protein Sequence Length: 572 Download |
MEAPPGLALL LFFGTLLVLP QSSHGATRYY TFNVTMQNVT RLCTTRAIPT VNGKFPGPKI 60 VTREGDRVVV KVVNNVKDNV TIHWHGVRQL RTGWSDGPAY VTQCPIRTGQ SYVYNFTITG 120 QRGTLLWHAH VSWMRATLYG PIVILPKRGV PYPFPVKPYK EVPIIFGEWF KTDPEAIIAQ 180 ALKTGAGPNV SDAFTINGLP GPLYNCSSKD TFKLKVQPGK WYLLRLINAA LNEDLFFSIA 240 NHTLTVVDVD AAYVKPFHAD VVLITPGQTT NVLLRAEPDA GCPAATHLML ARPYSTGQPG 300 TFDNTTVAAV LEYAPPGHIK SLPLLRPPLP TLNDTAFAAN YSAKLRSLAT PEYPANVPRG 360 VDRSFFFTVG LGTNPCPANR TCQGPNGSMF TASMNNVSFG MPTTALLQAH YSNIAGVYAT 420 DFPAAPLEAF NYTGTPPNNT HVSNGTKVVE LQYNTSVEVV LQGTSILGAE SHPLHLHGFD 480 FFVVGQGFGN YDSSKDPAKF NLVDPVQRNT VGVPAAGWVA IRFFADNPGV WFMHCHLEVH 540 TSWGLKMAWV VNDGPLPEQK LMPPPADLPK C* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07732 | Cu-oxidase_3 | 6.0e-43 | 33 | 149 | 119 | + Multicopper oxidase. This entry contains many divergent copper oxidase-like domains that are not recognised by the pfam00394 model. | ||
PLN02191 | PLN02191 | 8.0e-57 | 21 | 561 | 575 | + L-ascorbate oxidase | ||
PLN02604 | PLN02604 | 1.0e-72 | 21 | 545 | 560 | + oxidoreductase | ||
TIGR03388 | ascorbase | 7.0e-75 | 27 | 545 | 548 | + L-ascorbate oxidase, plant type. Members of this protein family are the copper-containing enzyme L-ascorbate oxidase (EC 1.10.3.3), also called ascorbase. This family is found in flowering plants, and shows greater sequence similarity to a family of laccases (EC 1.10.3.2) from plants than to other known ascorbate oxidases. | ||
TIGR03389 | laccase | 0 | 25 | 571 | 548 | + laccase, plant. Members of this protein family include the copper-containing enzyme laccase (EC 1.10.3.2), often several from a single plant species, and additional, uncharacterized, closely related plant proteins termed laccase-like multicopper oxidases. This protein family shows considerable sequence similarity to the L-ascorbate oxidase (EC 1.10.3.3) family. Laccases are enzymes of rather broad specificity, and classification of all proteins scoring about the trusted cutoff of this model as laccases may be appropriate. |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | NP_001049699.1 | 0 | 25 | 571 | 29 | 578 | Os03g0273200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001131665.1 | 0 | 3 | 571 | 4 | 576 | hypothetical protein LOC100193025 [Zea mays] |
RefSeq | XP_002300066.1 | 0 | 4 | 571 | 8 | 580 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002465485.1 | 0 | 1 | 571 | 1 | 576 | hypothetical protein SORBIDRAFT_01g039690 [Sorghum bicolor] |
RefSeq | XP_002531824.1 | 0 | 10 | 571 | 17 | 576 | laccase, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 28 | 545 | 4 | 517 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1asq_A | 0 | 28 | 545 | 4 | 517 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1asp_B | 0 | 28 | 545 | 4 | 517 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1asp_A | 0 | 28 | 545 | 4 | 517 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 1aso_B | 0 | 28 | 545 | 4 | 517 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |