Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015689m |
Family | AA1 |
Protein Properties | Length: 559 Molecular Weight: 62176.9 Isoelectric Point: 8.7188 |
Chromosome | Chromosome/Scaffold: 060510 Start: 1397 End: 3977 |
Description | SKU5 similar 11 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
AA1 | 51 | 509 | 0 |
PQKVILINGEFPGPTINCTSNNNILVNVFNMLDQPLLFHWHGIQQRKNSWQDGLPGTMCPIQPNTNWTYHWQPKDQIGSFYYFPSIGMQRAAGGYGLITV HSRDLIPVPFDPPADDFPVLVGDWYTKDHTVLAKNLDSGKGIGRPAGLIINGKNEKEASNPPMYNVEAGKTYRFRVCNIGIKASLNVRVQKHILKLVEME GSHTVQNTYDSLDVHIGQCLSFLVTADQTPGDYLLVASTRFIKEVSTITAVIRYKGSSTPPPPQIPESPSGWAWSINQWRSFRWNLTASAARPNPQGSYH YGQINITRTIKLSTSHGKADGKERYALNGVSHVDPDTPLKLAEYFNATNGVFQYNLIGDVPPAAGAPIKMAPNVVSAEFRTFIEVVFENPEKSIDTFHIN GYAFFAAGMGPGTWTPQCRKTYNLLDTVSRHTIQVYPRSWTAVMLTFDNAGMWNVRSNL |
Full Sequence |
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Protein Sequence Length: 559 Download |
MMVWPPMTMR GACAAALLVL VALVAGARAE DPYHFFEWKV TYGTKNILGT PQKVILINGE 60 FPGPTINCTS NNNILVNVFN MLDQPLLFHW HGIQQRKNSW QDGLPGTMCP IQPNTNWTYH 120 WQPKDQIGSF YYFPSIGMQR AAGGYGLITV HSRDLIPVPF DPPADDFPVL VGDWYTKDHT 180 VLAKNLDSGK GIGRPAGLII NGKNEKEASN PPMYNVEAGK TYRFRVCNIG IKASLNVRVQ 240 KHILKLVEME GSHTVQNTYD SLDVHIGQCL SFLVTADQTP GDYLLVASTR FIKEVSTITA 300 VIRYKGSSTP PPPQIPESPS GWAWSINQWR SFRWNLTASA ARPNPQGSYH YGQINITRTI 360 KLSTSHGKAD GKERYALNGV SHVDPDTPLK LAEYFNATNG VFQYNLIGDV PPAAGAPIKM 420 APNVVSAEFR TFIEVVFENP EKSIDTFHIN GYAFFAAGMG PGTWTPQCRK TYNLLDTVSR 480 HTIQVYPRSW TAVMLTFDNA GMWNVRSNLW DRHYLGEQLY ISVVSPARSL RDEYNFPETS 540 LRCGKVVGLP MPPSYAAA* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
PLN02168 | PLN02168 | 2.0e-169 | 32 | 546 | 531 | + copper ion binding / pectinesterase |
PLN02354 | PLN02354 | 0 | 30 | 557 | 529 | + copper ion binding / oxidoreductase |
PLN02835 | PLN02835 | 0 | 30 | 548 | 520 | + oxidoreductase |
PLN02991 | PLN02991 | 0 | 30 | 548 | 519 | + oxidoreductase |
PLN02792 | PLN02792 | 0 | 30 | 552 | 525 | + oxidoreductase |
Gene Ontology | |
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GO Term | Description |
GO:0005507 | copper ion binding |
GO:0016491 | oxidoreductase activity |
GO:0055114 | oxidation-reduction process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN27218.1 | 0 | 2 | 557 | 1 | 556 | unknown [Zea mays] |
GenBank | ACN34077.1 | 0 | 2 | 557 | 1 | 558 | unknown [Zea mays] |
RefSeq | NP_001044620.1 | 0 | 28 | 558 | 22 | 553 | Os01g0816700 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001151662.1 | 0 | 2 | 557 | 1 | 558 | L-ascorbate oxidase [Zea mays] |
RefSeq | XP_002456532.1 | 0 | 2 | 555 | 1 | 555 | hypothetical protein SORBIDRAFT_03g037970 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1asq_B | 0 | 36 | 544 | 6 | 539 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1asq_A | 0 | 36 | 544 | 6 | 539 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1asp_B | 0 | 36 | 544 | 6 | 539 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1asp_A | 0 | 36 | 544 | 6 | 539 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |
PDB | 1aso_B | 0 | 36 | 544 | 6 | 539 | A Chain A, Trehalose-6-Phosphate From E. Coli Bound With Udp-Glucose. |