Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015728m |
Family | GT1 |
Protein Properties | Length: 480 Molecular Weight: 52039.5 Isoelectric Point: 4.9849 |
Chromosome | Chromosome/Scaffold: 062772 Start: 832 End: 4173 |
Description | UDP-Glycosyltransferase superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT1 | 36 | 456 | 8.9e-37 |
LQLAGALHARGGGGLGVTVFHAAFNAPDPARHPAGFRFVPVGEGVPSADLVPSGSDADFAGALLRIDDRLREPFRECLRQALAEEEEEEEEGGGAAAACL VVDSNLRGIQLVAEELGVPTLVLRTGGAACLVAYMAFPVLCDKGLLPPASQDKAQLDMPLDELTPLRLRDVVFSAPAMHGNMTRCLQRLVDAARNSSGVI LNTFQDLEDSDIQKITSGLGVLVYTIGPLHKISSGTESSLLAQDQTCLKWLDKQEADSVLYVSLGSLASMDEKELLETAWGLANSQRPFLWVIRHNMVKS LSHEVSLPDGFEEATHGRGMVVPWAPQQEVLAHHAIGGFWTHNGWNSTLESICEGVPMICRPQFADQTINMRYVQEVWKIGFELEGELERGKIEMAITKL LCTEEGRQMRQRARDLRDKAA |
Full Sequence |
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Protein Sequence Length: 480 Download |
MATAGEAASP AGSGGGRRRR VLLFPVPFQG HLTPMLQLAG ALHARGGGGL GVTVFHAAFN 60 APDPARHPAG FRFVPVGEGV PSADLVPSGS DADFAGALLR IDDRLREPFR ECLRQALAEE 120 EEEEEEGGGA AAACLVVDSN LRGIQLVAEE LGVPTLVLRT GGAACLVAYM AFPVLCDKGL 180 LPPASQDKAQ LDMPLDELTP LRLRDVVFSA PAMHGNMTRC LQRLVDAARN SSGVILNTFQ 240 DLEDSDIQKI TSGLGVLVYT IGPLHKISSG TESSLLAQDQ TCLKWLDKQE ADSVLYVSLG 300 SLASMDEKEL LETAWGLANS QRPFLWVIRH NMVKSLSHEV SLPDGFEEAT HGRGMVVPWA 360 PQQEVLAHHA IGGFWTHNGW NSTLESICEG VPMICRPQFA DQTINMRYVQ EVWKIGFELE 420 GELERGKIEM AITKLLCTEE GRQMRQRARD LRDKAAKCIE EEGSSQSAIE LLLKRIMSF* 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
PLN02555 | PLN02555 | 3.0e-52 | 147 | 465 | 336 | + limonoid glucosyltransferase | ||
PLN03007 | PLN03007 | 1.0e-53 | 134 | 478 | 367 | + UDP-glucosyltransferase family protein | ||
PLN02534 | PLN02534 | 3.0e-54 | 22 | 477 | 497 | + UDP-glycosyltransferase | ||
PLN02448 | PLN02448 | 5.0e-67 | 21 | 476 | 487 | + UDP-glycosyltransferase family protein | ||
PLN02410 | PLN02410 | 5.0e-103 | 21 | 470 | 450 | + UDP-glucoronosyl/UDP-glucosyl transferase family protein |
Gene Ontology | |
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GO Term | Description |
GO:0008152 | metabolic process |
GO:0016758 | transferase activity, transferring hexosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ03338.1 | 0 | 12 | 469 | 13 | 471 | hypothetical protein OsI_25480 [Oryza sativa Indica Group] |
GenBank | EAZ39241.1 | 0 | 12 | 469 | 13 | 471 | hypothetical protein OsJ_23666 [Oryza sativa Japonica Group] |
RefSeq | NP_001059265.1 | 0 | 22 | 479 | 19 | 474 | Os07g0240600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001059267.1 | 0 | 12 | 479 | 13 | 481 | Os07g0241500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002459585.1 | 0 | 22 | 479 | 28 | 480 | hypothetical protein SORBIDRAFT_02g007080 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2pq6_A | 0 | 12 | 477 | 2 | 478 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 2c9z_A | 0 | 107 | 465 | 96 | 439 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 2c1z_A | 0 | 107 | 465 | 96 | 439 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt85h2- Insights Into The Structural Basis Of A Multifunctional (Iso) Flavonoid Glycosyltransferase |
PDB | 2c1x_A | 0 | 107 | 465 | 96 | 439 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
PDB | 2vg8_A | 0 | 20 | 472 | 8 | 463 | A Chain A, Structure And Activity Of A Flavonoid 3-O Glucosyltransferase Reveals The Basis For Plant Natural Product Modification |
Metabolic Pathways | |||
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Pathway Name | Reaction | EC | Protein Name |
starch biosynthesis | RXN-7710 | EC-2.4.1.18 | 1,4-α-glucan branching enzyme |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FL764544 | 240 | 192 | 431 | 0 |
FL764545 | 224 | 257 | 480 | 0 |
JG783470 | 237 | 244 | 480 | 0 |
FL761016 | 180 | 301 | 480 | 0 |
FL761015 | 180 | 301 | 480 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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