y
Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015870m |
Family | GT8 |
Protein Properties | Length: 486 Molecular Weight: 55274.9 Isoelectric Point: 8.4214 |
Chromosome | Chromosome/Scaffold: 062566 Start: 154 End: 4020 |
Description | Nucleotide-diphospho-sugar transferases superfamily protein |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT8 | 63 | 274 | 5.2e-24 |
YEFYVAVRVMMRSLTRVRADADRVLIASADVPRDWVRAMTEEDGVRVVIVENLRNPYASSLGGINRRFKLTLNKLYAWTLVDYERVVMIDSDNIFLQNTD ELFQCGQFCAVFINPCYFHTGLFVLQPSMDVFKGMLHDLEIGRENSDGADQGFLVGCYPDLLDKPMFHPPENGTKLNGTYRLPLGYQMDASYYYLKLHWH VPCGPNSVITFP |
Full Sequence |
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Protein Sequence Length: 486 Download |
MAAGLPPASE RRLAAVLLLL LGVTAAAASA GERRGLAARV EGPAARHRHA YAAMMYMGTP 60 RDYEFYVAVR VMMRSLTRVR ADADRVLIAS ADVPRDWVRA MTEEDGVRVV IVENLRNPYA 120 SSLGGINRRF KLTLNKLYAW TLVDYERVVM IDSDNIFLQN TDELFQCGQF CAVFINPCYF 180 HTGLFVLQPS MDVFKGMLHD LEIGRENSDG ADQGFLVGCY PDLLDKPMFH PPENGTKLNG 240 TYRLPLGYQM DASYYYLKLH WHVPCGPNSV ITFPSAPWFK PWYWWSWPIL PLGLSWHKQR 300 WDDLGYAAEM PVILMEVLMY IVIITITRLA RPGMTKLCYN RRPEKQNALV QWLIKMTVIV 360 AMVAAYSIPF FVIPRTVHPI MGWSIYLFGA LALSVLVINV FLLPPLAVLT TWLAIVGMLF 420 VMAFPWYRDG VVRVLAIFGY AFCSAPFLWT SLVRMMDSLQ TMLERDPFFP RLGEPTQDTE 480 FSKLY* 540 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5597 | COG5597 | 3.0e-5 | 129 | 226 | 107 | + Alpha-N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | ||
cd00505 | Glyco_transf_8 | 2.0e-5 | 132 | 216 | 112 | + Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+. | ||
cd06914 | GT8_GNT1 | 3.0e-6 | 74 | 195 | 134 | + GNT1 is a fungal enzyme that belongs to the GT 8 family. N-acetylglucosaminyltransferase is a fungal enzyme that catalyzes the addition of N-acetyl-D-glucosamine to mannotetraose side chains by an alpha 1-2 linkage during the synthesis of mannan. The N-acetyl-D-glucosamine moiety in mannan plays a role in the attachment of mannan to asparagine residues in proteins. The mannotetraose and its N-acetyl-D-glucosamine derivative side chains of mannan are the principle immunochemical determinants on the cell surface. N-acetylglucosaminyltransferase is a member of glycosyltransferase family 8, which are, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed, retaining glycosyltransferases. | ||
pfam01501 | Glyco_transf_8 | 1.0e-9 | 62 | 286 | 262 | + Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase. | ||
cd02537 | GT8_Glycogenin | 1.0e-54 | 64 | 300 | 247 | + Glycogenin belongs the GT 8 family and initiates the biosynthesis of glycogen. Glycogenin initiates the biosynthesis of glycogen by incorporating glucose residues through a self-glucosylation reaction at a Tyr residue, and then acts as substrate for chain elongation by glycogen synthase and branching enzyme. It contains a conserved DxD motif and an N-terminal beta-alpha-beta Rossmann-like fold that are common to the nucleotide-binding domains of most glycosyltransferases. The DxD motif is essential for coordination of the catalytic divalent cation, most commonly Mn2+. Glycogenin can be classified as a retaining glycosyltransferase, based on the relative anomeric stereochemistry of the substrate and product in the reaction catalyzed. It is placed in glycosyltransferase family 8 which includes lipopolysaccharide glucose and galactose transferases and galactinol synthases. |
Gene Ontology | |
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GO Term | Description |
GO:0016757 | transferase activity, transferring glycosyl groups |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ACN33883.1 | 0 | 3 | 485 | 2 | 488 | unknown [Zea mays] |
RefSeq | NP_001065345.1 | 0 | 30 | 485 | 36 | 492 | Os10g0555100 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001146684.1 | 0 | 3 | 485 | 2 | 486 | hypothetical protein LOC100280284 [Zea mays] |
RefSeq | NP_001148114.1 | 0 | 3 | 485 | 2 | 488 | transferase, transferring glycosyl groups [Zea mays] |
RefSeq | XP_002467515.1 | 0 | 3 | 485 | 2 | 486 | hypothetical protein SORBIDRAFT_01g029400 [Sorghum bicolor] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3u2x_B | 0.000000000002 | 71 | 216 | 22 | 168 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u2x_A | 0.000000000002 | 71 | 216 | 22 | 168 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u2v_B | 0.000000000002 | 71 | 216 | 22 | 168 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u2v_A | 0.000000000002 | 71 | 216 | 22 | 168 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |
PDB | 3u2u_B | 0.000000000002 | 71 | 216 | 22 | 168 | A Chain A, Crystal Structure Of Medicago Truncatula Ugt71g1 |