Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015944m |
Family | GT37 |
Protein Properties | Length: 530 Molecular Weight: 58879.1 Isoelectric Point: 8.3382 |
Chromosome | Chromosome/Scaffold: 062552 Start: 2604 End: 4622 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 81 | 522 | 0 |
TSTQEKLLGGLLVPGFDEGSCLSRYHSAFYRKAMARSPSPHLVKRLREHEALQRRCGPGTEAYRAAAARLGSSWHGDGDGSDGAACRYLVLVPYRGLGNN ILAMASAFLYAVLTGRALLLDRTTSPGDIFCEPFPGASWLLPRSFPVRDLQNLTGEVPESYRYLVQGDGDGAPAPAAAASSAVPRRRRRQYVFVDLDHSC TYHDKLFFCDDEQRFLRRAPWLLMRTDGYFVPALFLNPAYQEELDALFPRKDAVFYLLAHYLLHPTNKVWGLITRFHDAYLRNADERLGIQIRVFDGDAP FQHILDQILACTSQERLLPDVVMQEPRHPPAAGGARSKAVLMTGLSSWYYENVRWKYWQSATATGEAVSVHQPSHEEHQLSGYTTHDMKALAEMYLLGMT DKIVTSGWSTFGYVGSGLGGLTPWVMFRPENHTAPTPPCRRA |
Full Sequence |
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Protein Sequence Length: 530 Download |
MSLEGVVGAG ITQRPPQQCP DARRAEAHEG TVEPDAGPWI ARKKVTALAV CLVALPVLMT 60 TVSRRRDAPW TAASFWPLAP TSTQEKLLGG LLVPGFDEGS CLSRYHSAFY RKAMARSPSP 120 HLVKRLREHE ALQRRCGPGT EAYRAAAARL GSSWHGDGDG SDGAACRYLV LVPYRGLGNN 180 ILAMASAFLY AVLTGRALLL DRTTSPGDIF CEPFPGASWL LPRSFPVRDL QNLTGEVPES 240 YRYLVQGDGD GAPAPAAAAS SAVPRRRRRQ YVFVDLDHSC TYHDKLFFCD DEQRFLRRAP 300 WLLMRTDGYF VPALFLNPAY QEELDALFPR KDAVFYLLAH YLLHPTNKVW GLITRFHDAY 360 LRNADERLGI QIRVFDGDAP FQHILDQILA CTSQERLLPD VVMQEPRHPP AAGGARSKAV 420 LMTGLSSWYY ENVRWKYWQS ATATGEAVSV HQPSHEEHQL SGYTTHDMKA LAEMYLLGMT 480 DKIVTSGWST FGYVGSGLGG LTPWVMFRPE NHTAPTPPCR RARYSCFAH* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
cd11548 | NodZ_like | 0.0004 | 169 | 201 | 33 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. |
pfam03254 | XG_FTase | 0 | 79 | 522 | 445 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAD35724.1 | 0 | 1 | 522 | 1 | 519 | putative galactoside 2-alpha-L-fucosyltransferase [Oryza sativa Japonica Group] |
GenBank | EAZ00121.1 | 0 | 94 | 522 | 99 | 515 | hypothetical protein OsI_22125 [Oryza sativa Indica Group] |
GenBank | EAZ00130.1 | 0 | 1 | 522 | 1 | 519 | hypothetical protein OsI_22134 [Oryza sativa Indica Group] |
RefSeq | NP_001057124.1 | 0 | 70 | 522 | 4 | 447 | Os06g0212500 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002436693.1 | 0 | 1 | 523 | 1 | 514 | hypothetical protein SORBIDRAFT_10g007140 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DV541140 | 249 | 270 | 517 | 0 |
DR788766 | 225 | 293 | 517 | 0 |
FL813193 | 230 | 17 | 246 | 0 |
FL813192 | 163 | 361 | 523 | 0 |
FL813192 | 33 | 328 | 360 | 0.0001 |
Sequence Alignments (This image is cropped. Click for full image.) |
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