Basic Information | |
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Species | Panicum virgatum |
Cazyme ID | Pavirv00015945m |
Family | GT37 |
Protein Properties | Length: 558 Molecular Weight: 61482.3 Isoelectric Point: 7.7885 |
Chromosome | Chromosome/Scaffold: 062552 Start: 799 End: 2564 |
Description | fucosyltransferase 1 |
View CDS |
External Links |
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CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
GT37 | 75 | 531 | 0 |
STRRAERGAHDRLLGGLLSPDFDAATCLSRYQASKRWRPSPFPVSPYLIQKLRQYEANHRRCGPGTANYRAAMAQLMSGRNADRAECKYVVWLPLQGLGN RMLSVVSTFLYALLAGRVLLVHEPPEMAGLFCEPFPGTSWVLPPDFPYTDGFSADAKESYVNMLENSIVRSDGGGGGGDDGALPAYVYFHLEQISLRLQN HTFCEEDHRALGRFGWMVLRSDSYFAVALFLMPAYRGELGRMFPAKASVFHHLGRYLLHPGNRAWGIVERFYDGYLASADERLGIQVRPAPFLPITPEVM YEQIARCGREHGLLPQVTGDPGARPPASGGAAKVKAVLVVSLKPEYYDKLHGVYYTNATATGEVVTVFQPSHDQDQHTEALAHNERALAEIFLLSYSDTL VTTGFSTFGYAAHALAGLRPWLLLPPDRNTMRAEVACVRSASVEPCLHSPPSLVCRA |
Full Sequence |
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Protein Sequence Length: 558 Download |
MGSVRAIPGE RDLPPPDAEK RRPSRLGTVT VVLLLASPLL LLFFPFGDRA VVSIAADYPA 60 WQRFKVQSSG NAPSSTRRAE RGAHDRLLGG LLSPDFDAAT CLSRYQASKR WRPSPFPVSP 120 YLIQKLRQYE ANHRRCGPGT ANYRAAMAQL MSGRNADRAE CKYVVWLPLQ GLGNRMLSVV 180 STFLYALLAG RVLLVHEPPE MAGLFCEPFP GTSWVLPPDF PYTDGFSADA KESYVNMLEN 240 SIVRSDGGGG GGDDGALPAY VYFHLEQISL RLQNHTFCEE DHRALGRFGW MVLRSDSYFA 300 VALFLMPAYR GELGRMFPAK ASVFHHLGRY LLHPGNRAWG IVERFYDGYL ASADERLGIQ 360 VRPAPFLPIT PEVMYEQIAR CGREHGLLPQ VTGDPGARPP ASGGAAKVKA VLVVSLKPEY 420 YDKLHGVYYT NATATGEVVT VFQPSHDQDQ HTEALAHNER ALAEIFLLSY SDTLVTTGFS 480 TFGYAAHALA GLRPWLLLPP DRNTMRAEVA CVRSASVEPC LHSPPSLVCR AEQDLDPVAH 540 VPFLRHCEDV YSGLKLI* |
Functional Domains Download unfiltered results here | ||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description |
cd11548 | NodZ_like | 7.0e-5 | 168 | 486 | 330 | + Alpha 1,6-fucosyltransferase similar to Bradyrhizobium NodZ. Bradyrhizobium NodZ is an alpha 1,6-fucosyltransferase involved in the biosynthesis of the nodulation factor, a lipo-chitooligosaccharide formed by three-to-six beta-1,4-linked N-acetyl-d-glucosamine (GlcNAc) residues and a fatty acid acyl group attached to the nitrogen atom at the non-reducing end. NodZ transfers L-fucose from the GDP-beta-L-fucose donor to the reducing residue of the chitin oligosaccharide backbone, before the attachment of a fatty acid group. O-fucosyltransferase-like proteins are GDP-fucose dependent enzymes with similarities to the family 1 glycosyltransferases (GT1). They are soluble ER proteins that may be proteolytically cleaved from a membrane-associated preprotein, and are involved in the O-fucosylation of protein substrates, the core fucosylation of growth factor receptors, and other processes. |
pfam03254 | XG_FTase | 0 | 64 | 531 | 470 | + Xyloglucan fucosyltransferase. Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue. |
Gene Ontology | |
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GO Term | Description |
GO:0008107 | galactoside 2-alpha-L-fucosyltransferase activity |
GO:0016020 | membrane |
GO:0042546 | cell wall biogenesis |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | EAZ00131.1 | 0 | 85 | 557 | 75 | 547 | hypothetical protein OsI_22135 [Oryza sativa Indica Group] |
GenBank | EAZ36251.1 | 0 | 85 | 557 | 75 | 532 | hypothetical protein OsJ_20573 [Oryza sativa Japonica Group] |
RefSeq | NP_001048209.1 | 0 | 18 | 557 | 24 | 573 | Os02g0763200 [Oryza sativa (japonica cultivar-group)] |
RefSeq | NP_001057125.1 | 0 | 85 | 557 | 75 | 547 | Os06g0212600 [Oryza sativa (japonica cultivar-group)] |
RefSeq | XP_002438040.1 | 0 | 1 | 557 | 1 | 559 | hypothetical protein SORBIDRAFT_10g007150 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
DR826081 | 269 | 125 | 391 | 0 |
CJ678630 | 242 | 161 | 391 | 0 |
FL858478 | 238 | 85 | 320 | 0 |
BE358912 | 188 | 370 | 556 | 0 |
CJ833186 | 215 | 149 | 361 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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