y
Basic Information | |
---|---|
Species | Panicum virgatum |
Cazyme ID | Pavirv00016039m |
Family | GT77 |
Protein Properties | Length: 392 Molecular Weight: 44635.1 Isoelectric Point: 8.8698 |
Chromosome | Chromosome/Scaffold: 063884 Start: 1934 End: 4440 |
Description | Nucleotide-diphospho-sugar transferase family protein |
View CDS |
External Links |
---|
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
GT77 | 147 | 366 | 0 |
IPNFLVVALDDNIESFCKSKGVPVYRRDPDEGIDNIAKTGGNHAVSGLKFRVLREFLQLGYSILLSDIDIIFLRNPFDHLYRDSDVESMSDGHNNMTAYG FNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVADRLSHEKAWDQAVFNEELFFPSHPGYEGLYASRRTMDIYLFMNSKVLFKTVRKDA QLKKLKPVIVHLNYHPDKLD |
Full Sequence |
---|
Protein Sequence Length: 392 Download |
MGHRKVGRAI NFGHDIPHLH VFNPAHVVHI RNQAACESSG RVTNLESQLA SLERKNAELR 60 RQINELSMKL QLAGQGKDET LYKAGPFGTV KALRTNPTVM PDESVNPRLA KILGEVAVKK 120 ELIVALANSN VREMLEVWFT NIKRVGIPNF LVVALDDNIE SFCKSKGVPV YRRDPDEGID 180 NIAKTGGNHA VSGLKFRVLR EFLQLGYSIL LSDIDIIFLR NPFDHLYRDS DVESMSDGHN 240 NMTAYGFNDV FDEPSMGWAR YAHTMRIWVY NSGFFYIRPT IPSIELLDRV ADRLSHEKAW 300 DQAVFNEELF FPSHPGYEGL YASRRTMDIY LFMNSKVLFK TVRKDAQLKK LKPVIVHLNY 360 HPDKLDRMKA VIEFYVNGKQ DALQRFPDGS E* 420 |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam03407 | Nucleotid_trans | 1.0e-49 | 147 | 368 | 232 | + Nucleotide-diphospho-sugar transferase. Proteins in this family have been been predicted to be nucleotide-diphospho-sugar transferases. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0005783 | endoplasmic reticulum |
Annotations - NR Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
DDBJ | BAC83249.1 | 0 | 32 | 391 | 66 | 426 | hypothetical protein [Oryza sativa Japonica Group] |
GenBank | EEC82354.1 | 0 | 32 | 391 | 66 | 426 | hypothetical protein OsI_26669 [Oryza sativa Indica Group] |
GenBank | EEE67496.1 | 0 | 24 | 391 | 26 | 390 | hypothetical protein OsJ_24927 [Oryza sativa Japonica Group] |
RefSeq | NP_001140234.1 | 0 | 24 | 391 | 52 | 423 | hypothetical protein LOC100272274 [Zea mays] |
RefSeq | XP_002465078.1 | 0 | 32 | 391 | 65 | 425 | hypothetical protein SORBIDRAFT_01g031700 [Sorghum bicolor] |
EST Download unfiltered results here | ||||
---|---|---|---|---|
Hit | Length | Start | End | EValue |
JG951730 | 285 | 35 | 319 | 0 |
GO848535 | 299 | 94 | 392 | 0 |
JG948479 | 284 | 76 | 359 | 0 |
GO883664 | 306 | 32 | 336 | 0 |
GO883664 | 34 | 329 | 362 | 0.0009 |
Sequence Alignments (This image is cropped. Click for full image.) |
---|